Orthogroup:group_2409


Homologs in group_2409

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19320 FBDBKF_19320 Morganella morganii S1 tPR TPR repeat
EHELCC_07605 EHELCC_07605 Morganella morganii S2 tPR TPR repeat
NLDBIP_07930 NLDBIP_07930 Morganella morganii S4 tPR TPR repeat
LHKJJB_07465 LHKJJB_07465 Morganella morganii S3 tPR TPR repeat
HKOGLL_03465 HKOGLL_03465 Morganella morganii S5 tPR TPR repeat
F4V73_RS16880 F4V73_RS16880 Morganella psychrotolerans - SEL1-like repeat protein
PMI_RS19655 PMI_RS19655 Proteus mirabilis HI4320 - hypothetical protein

Distribution of group_2409 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2409 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2409

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2409.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tPR 5
2 - 2

Product

# Product Occurence
1 TPR repeat 5
2 SEL1-like repeat protein 1
3 hypothetical protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0790 7 R General function prediction only (R) TPR repeat

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07126 7 uncharacterized protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF08238 7 Sel1 repeat

Annotations of the 23 SwissProt hits

Annotation Number of occurrences
Beta-lactamase HcpA 1
DAP3-binding cell death enhancer 1 1
ERAD-associated E3 ubiquitin-protein ligase component HRD3 1
ERAD-associated E3 ubiquitin-protein ligase component HRD3A 1
LRP2-binding protein 5
Protein sel-1 homolog 1 4
Protein sel-1 homolog 2 3
Putative beta-lactamase HcpC 2
Putative beta-lactamase HcpD 1
Putative sel1-like repeat-containing protein L18 1
Putative sel1-like repeat-containing protein L21 1
Secretory immunoglobulin A-binding protein EsiB 1
Sel1-repeat-containing protein YbeQ 1

Protein length

Min length 150
Max length 1560
Mean length (sd) 1358.0 (532.7)
Median length 1560.0

Protein length distribution