Homologs in group_2175

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16360 FBDBKF_16360 29.9 Morganella morganii S1 - UDP-glucose 4-epimerase
EHELCC_16395 EHELCC_16395 29.9 Morganella morganii S2 - UDP-glucose 4-epimerase
NLDBIP_16945 NLDBIP_16945 29.9 Morganella morganii S4 - UDP-glucose 4-epimerase
LHKJJB_16865 LHKJJB_16865 29.9 Morganella morganii S3 - UDP-glucose 4-epimerase
HKOGLL_16975 HKOGLL_16975 29.9 Morganella morganii S5 - UDP-glucose 4-epimerase
F4V73_RS17215 F4V73_RS17215 28.8 Morganella psychrotolerans - NAD-dependent epimerase/dehydratase family protein

Distribution of the homologs in the orthogroup group_2175

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2175

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75821 2.73e-98 296 44 3 333 3 ybjS Uncharacterized protein YbjS Escherichia coli (strain K12)
P0DX23 1.2e-96 292 44 4 334 1 NUT96_16600 3-beta-hydroxysteroid dehydrogenase Klebsiella aerogenes
B2FI29 3.05e-31 123 31 8 331 1 oleD 2-alkyl-3-oxoalkanoate reductase Stenotrophomonas maltophilia (strain K279a)
Q8EG63 4.03e-28 115 28 7 332 1 oleD 2-alkyl-3-oxoalkanoate reductase Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
H1ZZB0 8.69e-27 111 31 10 329 1 auaH Aurachin B dehydrogenase Stigmatella aurantiaca
Q9R1J0 3.1e-25 107 28 12 352 1 Nsdhl Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating Mus musculus
Q5PPL3 6.91e-25 106 28 14 355 2 Nsdhl Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating Rattus norvegicus
Q9FX01 1.47e-21 98 27 8 309 1 3BETAHSD/D1 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 Arabidopsis thaliana
Q15738 2.84e-21 96 28 13 343 1 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating Homo sapiens
Q3ZBE9 3.09e-21 96 26 11 346 2 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating Bos taurus
Q67ZE1 5.81e-20 94 29 9 272 1 3BETAHSD/D2 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 Arabidopsis thaliana
Q8PDW5 3.18e-19 90 30 9 333 1 oleD 2-alkyl-3-oxoalkanoate reductase Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
O43050 3.55e-18 87 29 6 251 3 erg26 Sterol-4-alpha-carboxylate 3-dehydrogenase erg26, decarboxylating Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P53199 6.27e-18 86 27 10 299 1 ERG26 Sterol-4-alpha-carboxylate 3-dehydrogenase ERG26, decarboxylating Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q5A1B0 1.68e-17 85 28 9 298 1 ERG26 Sterol-4-alpha-carboxylate 3-dehydrogenase ERG26, decarboxylating Candida albicans (strain SC5314 / ATCC MYA-2876)
P0DX24 1.64e-13 73 23 10 339 1 MN2019_09805 3-beta-hydroxysteroid dehydrogenase Mycolicibacterium neoaurum
Q8WUS8 6.09e-13 72 24 8 330 1 SDR42E1 Short-chain dehydrogenase/reductase family 42E member 1 Homo sapiens
Q0IH73 6.26e-13 72 23 11 356 2 sdr42e1 Short-chain dehydrogenase/reductase family 42E member 1 Xenopus laevis
A8DZE7 2.61e-12 70 24 11 353 2 sdr42e1 Short-chain dehydrogenase/reductase family 42E member 1 Danio rerio
P73212 2.98e-12 70 25 10 343 3 dfrA Putative dihydroflavonol 4-reductase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q32L94 3.27e-12 70 24 8 329 2 SDR42E1 Short-chain dehydrogenase/reductase family 42E member 1 Bos taurus
P55584 3.49e-12 70 24 9 299 3 NGR_a02300 Uncharacterized protein y4nL Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q4R7R1 6.7e-12 69 24 8 334 2 SDR42E1 Short-chain dehydrogenase/reductase family 42E member 1 Macaca fascicularis
Q9D665 8.16e-12 69 24 10 333 1 Sdr42e1 Short-chain dehydrogenase/reductase family 42E member 1 Mus musculus
Q60A54 1.47e-11 67 28 12 328 1 sdmB Sterol demethylase protein B Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)
A6NKP2 1.99e-11 68 24 12 342 3 SDR42E2 Putative short-chain dehydrogenase/reductase family 42E member 2 Homo sapiens
P26150 2.65e-11 67 25 16 369 1 Hsd3b3 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 3 Mus musculus
D4GU72 4.24e-11 66 30 13 279 3 agl12 Low-salt glycan biosynthesis protein Agl12 Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
Q4X017 4.53e-11 67 25 13 333 3 erg26 Sterol-4-alpha-carboxylate 3-dehydrogenase erg26, decarboxylating Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293)
Q62878 8.76e-11 65 26 17 371 2 Hsd3b6 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 4 Rattus norvegicus
P24815 1.26e-10 65 27 17 373 1 Hsd3b1 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 Mus musculus
A9X4U2 1.62e-10 65 24 12 350 2 3BETAHSD/D3 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3 Arabidopsis thaliana
P9WQP7 8.68e-10 62 23 9 336 1 Rv1106c 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WQP6 8.68e-10 62 23 9 336 3 MT1137 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q54L85 9.36e-10 62 21 10 332 3 nsdhl Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating Dictyostelium discoideum
P55579 1.13e-09 62 24 7 327 3 NGR_a02350 Uncharacterized protein y4nG Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q56623 1.81e-09 61 25 13 335 3 galE UDP-glucose 4-epimerase Vibrio cholerae
P26149 2.14e-09 61 24 15 369 1 Hsd3b2 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 Mus musculus
Q61767 5.41e-09 60 25 16 371 1 Hsd3b4 NADPH-dependent 3-keto-steroid reductase Hsd3b4 Mus musculus
Q8VDR7 6.75e-09 60 23 11 258 2 Tgds dTDP-D-glucose 4,6-dehydratase Mus musculus
Q61694 1.09e-08 59 25 14 358 1 Hsd3b5 NADPH-dependent 3-keto-steroid reductase Hsd3b5 Mus musculus
Q8X7P7 1.5e-08 58 21 5 239 1 gnu N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase Escherichia coli O157:H7
O95455 2.62e-08 58 22 9 246 1 TGDS dTDP-D-glucose 4,6-dehydratase Homo sapiens
P27365 2.65e-08 58 24 10 287 2 HSD3B1 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 Macaca mulatta
Q9RR28 2.66e-08 58 26 15 361 3 oleE dTDP-glucose 4,6-dehydratase Streptomyces antibioticus
Q64421 3.09e-08 58 26 20 374 2 HSD3B2 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 Mesocricetus auratus
P27364 4.39e-08 57 23 8 264 1 Hsd3b5 NADPH-dependent 3-keto-steroid reductase Hsd3b5 Rattus norvegicus
P22071 6.3e-08 57 25 11 266 1 Hsd3b1 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 Rattus norvegicus
Q5BK63 8.28e-08 57 25 13 340 1 Ndufa9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial Rattus norvegicus
A6QLW2 9.05e-08 56 22 10 258 2 TGDS dTDP-D-glucose 4,6-dehydratase Bos taurus
Q05026 1.27e-07 56 23 7 294 3 galE UDP-glucose 4-epimerase Neisseria gonorrhoeae
P14893 1.33e-07 56 27 11 264 1 HSD3B 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase Bos taurus
O35469 1.54e-07 56 25 17 369 1 Hsd3b6 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 6 Mus musculus
P22072 1.98e-07 55 25 9 261 2 Hsd3b 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 Rattus norvegicus
Q9SN58 7.02e-07 53 23 11 363 1 UGE5 UDP-glucose 4-epimerase 5 Arabidopsis thaliana
Q9DC69 7.07e-07 53 26 12 342 1 Ndufa9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial Mus musculus
O34886 7.43e-07 53 22 13 348 3 ytcB Uncharacterized UDP-glucose epimerase YtcB Bacillus subtilis (strain 168)
P26439 1.13e-06 53 23 10 287 1 HSD3B2 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 Homo sapiens
Q9SYM5 2.51e-06 52 24 11 250 1 RHM1 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 Arabidopsis thaliana
P14060 2.51e-06 52 23 13 356 1 HSD3B1 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 Homo sapiens
O46516 5.29e-06 51 24 10 261 2 HSD3B 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase Equus caballus
Q6E7F4 5.79e-06 51 22 14 369 1 rmlB dTDP-glucose 4,6-dehydratase Escherichia coli
P55180 6.74e-06 50 26 11 294 3 galE UDP-glucose 4-epimerase Bacillus subtilis (strain 168)
P34943 8.33e-06 50 23 10 270 1 NDUFA9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial Bos taurus
Q59745 1.14e-05 50 26 12 288 3 exoB UDP-glucose 4-epimerase Rhizobium leguminosarum bv. trifolii
Q9HDU3 1.57e-05 50 26 9 245 3 gal10 Bifunctional protein gal10 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q5IFP1 1.59e-05 49 25 11 264 2 HSD3B 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase Canis lupus familiaris
Q9CNY5 2e-05 49 25 6 242 3 galE UDP-glucose 4-epimerase Pasteurella multocida (strain Pm70)
Q9N119 2.34e-05 49 23 11 263 2 HSD3B 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase Sus scrofa
Q59678 3.1e-05 48 25 7 244 3 galE UDP-glucose 4-epimerase Mannheimia haemolytica
P25284 3.15e-05 48 28 7 179 1 nuo40 NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
O19883 3.58e-05 48 27 3 136 3 ycf39 Photosystem II assembly factor Ycf39 Cyanidium caldarium
Q564Q1 5.72e-05 48 23 9 351 1 gale-1 UDP-glucose 4-epimerase Caenorhabditis elegans
Q60555 6.77e-05 47 24 17 371 2 HSD3B1 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 Mesocricetus auratus
Q04973 9.94e-05 47 24 13 298 3 vipB Vi polysaccharide biosynthesis protein VipB/TviC Salmonella typhi
P24325 0.000103 47 25 6 242 3 galE UDP-glucose 4-epimerase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P56986 0.000131 47 23 9 247 3 galE UDP-glucose 4-epimerase Neisseria meningitidis serogroup C
Q9F7D4 0.000154 46 26 8 242 3 galE UDP-glucose 4-epimerase Yersinia pestis
P37759 0.000185 46 24 17 365 3 rfbB dTDP-glucose 4,6-dehydratase 1 Escherichia coli (strain K12)
O78472 0.000281 45 34 2 113 3 ycf39 Photosystem II assembly factor Ycf39 Guillardia theta
P56997 0.000311 45 24 9 248 3 galE UDP-glucose 4-epimerase Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
Q6K9A2 0.000358 45 25 12 313 1 CCR1 Cinnamoyl-CoA reductase 1 Oryza sativa subsp. japonica
Q8LNZ3 0.000362 45 27 9 245 2 UGE-1 UDP-glucose 4-epimerase 1 Oryza sativa subsp. japonica
Q54WS6 0.000577 45 20 11 257 3 tgds dTDP-D-glucose 4,6-dehydratase Dictyostelium discoideum
Q9L9E8 0.000849 44 24 12 354 3 novT dTDP-glucose 4,6-dehydratase Streptomyces niveus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16250
Feature type CDS
Gene -
Product NAD(P)-dependent oxidoreductase
Location 61182 - 62186 (strand: -1)
Length 1005 (nucleotides) / 334 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2175
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF01370 NAD dependent epimerase/dehydratase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0451 Cell wall/membrane/envelope biogenesis (M) M Nucleoside-diphosphate-sugar epimerase

Protein Sequence

MRILVTGATSGLGRNAADMLLREGYEVVACGRDTAAGAALTVAGAVFRPADLRTLTPEAATALMADCQAVWHCAALSAPWGDKAEFEAVNLTATRILAQAAADAGIVRFVHISTPAIYFNFTHQQDIRESVVNHRFANEYARTKYLAEQAIADIVASYPATIFVILRPRGLFGPHDRVLLPRLMAQVRARNGRLILPGGGKNAFDLTYVENVVHAMSLATTQPVKSGSVYNITNQDPQPLITTLRALFALTGAQCRVKSAPYPLLYGLAFCLEKLAGSGKEPLLTRYSLGAAYFTMTLNNERAQNELGYYPRYTMAEGIARTAHWLNNEKQGEL

Flanking regions ( +/- flanking 50bp)

CTGGTTGGCACAGCCGCGGGGCTGGCACTCTCTGCAATGGTACTGGTGCCGTGAGAATTTTAGTGACGGGGGCAACCAGCGGGCTGGGACGCAACGCAGCAGACATGTTGCTGCGGGAAGGGTATGAAGTTGTCGCCTGCGGGCGTGATACGGCAGCGGGTGCAGCACTGACGGTTGCCGGTGCGGTTTTCCGCCCCGCTGATCTGCGCACACTGACCCCGGAAGCAGCCACGGCTCTGATGGCGGATTGTCAGGCAGTCTGGCACTGCGCGGCACTTTCCGCCCCCTGGGGGGATAAGGCAGAATTTGAGGCGGTGAACCTGACCGCGACCCGGATACTGGCTCAGGCGGCAGCGGACGCCGGTATTGTGCGGTTTGTGCATATTTCGACCCCGGCAATTTATTTTAACTTTACGCACCAGCAAGATATCCGGGAATCGGTGGTGAATCACCGGTTTGCCAATGAGTATGCGCGGACTAAATATCTGGCGGAGCAGGCGATTGCTGACATTGTGGCGTCTTACCCGGCAACTATTTTTGTGATTCTGCGTCCGCGCGGGCTATTCGGACCTCATGACCGGGTATTGCTGCCGCGCCTGATGGCACAGGTTCGTGCGCGTAACGGCAGACTGATCCTTCCCGGCGGCGGAAAGAATGCGTTTGATCTGACCTATGTGGAAAATGTGGTGCATGCCATGTCGCTGGCGACTACGCAGCCGGTAAAAAGCGGCTCAGTTTATAATATTACCAATCAGGATCCGCAACCGCTTATCACCACGCTACGCGCACTGTTTGCACTGACCGGCGCACAGTGCCGGGTGAAATCTGCACCTTATCCGCTGTTGTATGGTCTGGCGTTTTGTCTGGAAAAATTAGCGGGATCGGGAAAAGAGCCGCTGTTGACACGCTACAGCCTGGGCGCGGCATATTTCACTATGACACTTAATAATGAGCGTGCGCAGAATGAGCTGGGATATTATCCGCGTTACACGATGGCGGAAGGAATAGCCCGCACCGCGCACTGGCTGAATAATGAAAAGCAGGGTGAGTTATGATGAAAATCCGGGTTTTTGAAGCCGGTTACTGCACCCATCCGGGCTGTGTG