Homologs in group_96

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11 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12065 FBDBKF_12065 93.2 Morganella morganii S1 gltS sodium/glutamate symporter
FBDBKF_20390 FBDBKF_20390 53.5 Morganella morganii S1 gltS sodium/glutamate symporter
EHELCC_14240 EHELCC_14240 93.2 Morganella morganii S2 gltS sodium/glutamate symporter
EHELCC_19715 EHELCC_19715 53.5 Morganella morganii S2 gltS sodium/glutamate symporter
NLDBIP_15335 NLDBIP_15335 93.2 Morganella morganii S4 gltS sodium/glutamate symporter
NLDBIP_19695 NLDBIP_19695 53.5 Morganella morganii S4 gltS sodium/glutamate symporter
LHKJJB_15275 LHKJJB_15275 93.2 Morganella morganii S3 gltS sodium/glutamate symporter
LHKJJB_19660 LHKJJB_19660 53.5 Morganella morganii S3 gltS sodium/glutamate symporter
HKOGLL_14395 HKOGLL_14395 93.2 Morganella morganii S5 gltS sodium/glutamate symporter
HKOGLL_19575 HKOGLL_19575 53.5 Morganella morganii S5 gltS sodium/glutamate symporter
PMI_RS14170 PMI_RS14170 80.0 Proteus mirabilis HI4320 gltS sodium/glutamate symporter

Distribution of the homologs in the orthogroup group_96

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_96

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AER9 0.0 528 72 1 405 3 gltS Sodium/glutamate symporter Shigella flexneri
P0AER8 0.0 528 72 1 405 1 gltS Sodium/glutamate symporter Escherichia coli (strain K12)
P45240 7.1e-139 405 55 3 394 3 gltS Sodium/glutamate symporter Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14580
Feature type CDS
Gene gltS
Product sodium/glutamate symporter
Location 148141 - 149373 (strand: 1)
Length 1233 (nucleotides) / 410 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_96
Orthogroup size 12
N. genomes 7

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Genomic region

Domains

PF03616 Sodium/glutamate symporter

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0786 Amino acid transport and metabolism (E) E Na+/glutamate symporter

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03312 glutamate:Na+ symporter, ESS family - -

Protein Sequence

MYQLDVYGTLVAATLVLLLGRKLVKSVPFLEKYTIPEPVAGGLLVAIVLLGFKSGMDLEVKFDDSLKDPLMLAFFATIGLNANLASLRAGGKTLFIFVLAVVGLLLVQNTVGISLAKMMGLDPLIGLLAGSITLSGGHGTGAAWGKIFTDSYGFSSATEVAIACATFGLVLGGLIGGPVARFLIKKTAMNDVNQQDDEAPSAFEKPQAGRMITSMVLLETIALIAICLLAGSYLFGVLSDFFLSRGWKVQIPTFVCVLFIGVILSNSLSLMGFYRVFERAVSVLGNVSLSLFLAMALMSLKLWEVASLAIPMLVILAVQTVVMAMYAIFVTYRVMGKNYDAAVLAAGHCGFGMGATPTAIANMQAVTDRFGPSHVAFLVVPMVGAFFLDLINALVIPFFLALPVFPTVGG

Flanking regions ( +/- flanking 50bp)

TTAGCGCGACTATTGATGTAATAAATACCTACAATAAAAGGGGTACGTGAATGTATCAACTCGACGTTTACGGCACGCTTGTGGCGGCCACACTCGTCCTCTTATTAGGACGTAAACTCGTAAAATCAGTACCATTCCTCGAAAAATATACCATTCCTGAACCTGTGGCCGGTGGTCTTCTGGTTGCAATTGTATTACTTGGGTTCAAATCGGGGATGGATCTGGAAGTTAAATTTGATGACTCGCTGAAAGACCCGCTGATGCTGGCATTTTTCGCCACTATCGGGTTAAACGCAAATCTTGCCAGCCTGCGTGCAGGCGGTAAAACGTTATTTATCTTCGTATTAGCTGTTGTGGGTCTGCTTCTTGTACAGAACACAGTCGGCATTTCGCTGGCAAAAATGATGGGTCTTGATCCGCTGATTGGTTTACTGGCAGGGTCGATTACCTTATCCGGCGGACACGGTACGGGTGCTGCGTGGGGTAAAATCTTCACAGACAGCTACGGCTTCAGTTCGGCGACAGAAGTGGCGATTGCCTGTGCAACATTCGGTCTGGTACTCGGTGGTCTGATTGGTGGTCCGGTTGCCCGTTTTCTTATCAAGAAAACAGCAATGAATGATGTAAATCAGCAGGATGATGAAGCACCGAGCGCGTTTGAAAAACCGCAGGCCGGGCGCATGATCACCTCGATGGTATTGCTGGAAACTATTGCACTGATCGCGATTTGTCTGCTGGCGGGTTCGTATCTGTTTGGCGTGTTATCTGACTTCTTCCTCAGCAGAGGATGGAAAGTTCAGATCCCGACATTCGTTTGTGTGTTATTTATCGGCGTTATATTGAGTAACAGCCTGTCATTAATGGGTTTTTACCGCGTATTTGAGCGGGCAGTATCCGTTCTCGGTAACGTCAGTCTGTCACTTTTCCTGGCAATGGCACTGATGAGCCTGAAGCTCTGGGAAGTTGCTTCGCTGGCCATACCAATGTTGGTTATTCTGGCGGTACAGACTGTTGTGATGGCGATGTACGCCATTTTCGTCACTTACCGCGTGATGGGTAAAAACTATGATGCCGCGGTATTAGCAGCGGGTCACTGTGGTTTTGGTATGGGGGCAACACCAACAGCGATTGCTAACATGCAGGCGGTAACCGATCGTTTCGGACCTTCTCATGTCGCTTTTCTGGTGGTGCCAATGGTCGGGGCATTCTTCCTTGATTTGATTAATGCACTCGTCATTCCGTTCTTCCTGGCGTTACCCGTCTTCCCGACGGTGGGTGGCTGACAGAACGTTATTATTAAAGCAGGTAAGCCACCCGTGCGGATGTTCGGGTG