COG0786


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0786, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Na+/glutamate symporter
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0786 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_96 FBDBKF_12065 64868 66100 -1 gltS sodium/glutamate symporter Morganella morganii S1
1 group_96 FBDBKF_20390 480 1685 -1 gltS sodium/glutamate symporter Morganella morganii S1
2 group_96 EHELCC_14240 68605 69837 1 gltS sodium/glutamate symporter Morganella morganii S2
3 group_96 EHELCC_19715 480 1685 -1 gltS sodium/glutamate symporter Morganella morganii S2
4 group_96 NLDBIP_15335 72542 73774 1 gltS sodium/glutamate symporter Morganella morganii S4
5 group_96 NLDBIP_19695 480 1685 -1 gltS sodium/glutamate symporter Morganella morganii S4
6 group_96 LHKJJB_15275 64868 66100 -1 gltS sodium/glutamate symporter Morganella morganii S3
7 group_96 LHKJJB_19660 561 1766 -1 gltS sodium/glutamate symporter Morganella morganii S3
8 group_96 HKOGLL_14395 51531 52763 -1 gltS sodium/glutamate symporter Morganella morganii S5
9 group_96 HKOGLL_19575 561 1766 -1 gltS sodium/glutamate symporter Morganella morganii S5
10 group_96 F4V73_RS14580 148141 149373 1 gltS sodium/glutamate symporter Morganella psychrotolerans
11 group_96 PMI_RS14170 3145997 3147211 -1 gltS sodium/glutamate symporter Proteus mirabilis HI4320