Orthogroup:group_96


Homologs in group_96

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12 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12065 FBDBKF_12065 Morganella morganii S1 gltS sodium/glutamate symporter
FBDBKF_20390 FBDBKF_20390 Morganella morganii S1 gltS sodium/glutamate symporter
EHELCC_14240 EHELCC_14240 Morganella morganii S2 gltS sodium/glutamate symporter
EHELCC_19715 EHELCC_19715 Morganella morganii S2 gltS sodium/glutamate symporter
NLDBIP_15335 NLDBIP_15335 Morganella morganii S4 gltS sodium/glutamate symporter
NLDBIP_19695 NLDBIP_19695 Morganella morganii S4 gltS sodium/glutamate symporter
LHKJJB_15275 LHKJJB_15275 Morganella morganii S3 gltS sodium/glutamate symporter
LHKJJB_19660 LHKJJB_19660 Morganella morganii S3 gltS sodium/glutamate symporter
HKOGLL_14395 HKOGLL_14395 Morganella morganii S5 gltS sodium/glutamate symporter
HKOGLL_19575 HKOGLL_19575 Morganella morganii S5 gltS sodium/glutamate symporter
F4V73_RS14580 F4V73_RS14580 Morganella psychrotolerans gltS sodium/glutamate symporter
PMI_RS14170 PMI_RS14170 Proteus mirabilis HI4320 gltS sodium/glutamate symporter

Distribution of group_96 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_96 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_96

Orthogroup content: 12 members

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This page summarizes the annotation of all members of the orthologous group group_96.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 gltS 12

Product

# Product Occurence
1 sodium/glutamate symporter 12

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0786 12 E Amino acid transport and metabolism (E) Na+/glutamate symporter

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03312 12 glutamate:Na+ symporter, ESS family - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03616 12 Sodium/glutamate symporter

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Sodium/glutamate symporter 3

Protein length

Min length 401
Max length 410
Mean length (sd) 405.8 (4.5)
Median length 407.0

Protein length distribution