Homologs in group_96

Help

11 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12065 FBDBKF_12065 53.5 Morganella morganii S1 gltS sodium/glutamate symporter
FBDBKF_20390 FBDBKF_20390 100.0 Morganella morganii S1 gltS sodium/glutamate symporter
EHELCC_14240 EHELCC_14240 53.5 Morganella morganii S2 gltS sodium/glutamate symporter
EHELCC_19715 EHELCC_19715 100.0 Morganella morganii S2 gltS sodium/glutamate symporter
NLDBIP_15335 NLDBIP_15335 53.5 Morganella morganii S4 gltS sodium/glutamate symporter
LHKJJB_15275 LHKJJB_15275 53.5 Morganella morganii S3 gltS sodium/glutamate symporter
LHKJJB_19660 LHKJJB_19660 100.0 Morganella morganii S3 gltS sodium/glutamate symporter
HKOGLL_14395 HKOGLL_14395 53.5 Morganella morganii S5 gltS sodium/glutamate symporter
HKOGLL_19575 HKOGLL_19575 100.0 Morganella morganii S5 gltS sodium/glutamate symporter
F4V73_RS14580 F4V73_RS14580 53.5 Morganella psychrotolerans gltS sodium/glutamate symporter
PMI_RS14170 PMI_RS14170 50.6 Proteus mirabilis HI4320 gltS sodium/glutamate symporter

Distribution of the homologs in the orthogroup group_96

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_96

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45240 4.1e-151 436 56 1 375 3 gltS Sodium/glutamate symporter Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0AER9 1.56e-116 348 51 1 376 3 gltS Sodium/glutamate symporter Shigella flexneri
P0AER8 1.56e-116 348 51 1 376 1 gltS Sodium/glutamate symporter Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_19695
Feature type CDS
Gene gltS
Product sodium/glutamate symporter
Location 480 - 1685 (strand: -1)
Length 1206 (nucleotides) / 401 (amino acids)

Contig

Accession ZDB_554
Length 3942 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_96
Orthogroup size 12
N. genomes 7

Actions

Genomic region

Domains

PF03616 Sodium/glutamate symporter

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0786 Amino acid transport and metabolism (E) E Na+/glutamate symporter

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03312 glutamate:Na+ symporter, ESS family - -

Protein Sequence

MILDASYTLLVACIALLIGMFVVKFTPFLQKNHIPEAVVGGFIVAIVLLIIDKTSGYSFTFDASLQSLLMLTFFSSIGLSSDFSRLIKGGKPLVLLTIAVTILIAIQNTVGMSMAVMMNESPFIGLIAGSITLTGGHGNAGAWGPILADKYGVTGAVELAMACATLGLVLGGLVGGPVARHLLKKVSIPKTTEQERDTIVEAFEQPSVKRKINANNVIETISMLIICIVVGGYISALFKDTFLQLPTFVWCLFVGIIIRNTLTHVFKHEVFEPTVDVLGSVALSLFLAMALMSLKFGQLASMAGPVLIIIAVQTVVMVLFACFVTFKMMGKDYDAVVISAGHCGFGMGATPTAIANMQTVTKAFGPSHKAFLVVPMVGAFIVDISNSILIKIFIEIGTYFT

Flanking regions ( +/- flanking 50bp)

TTGTTAAATTGTTATAGTGAAAATTCTGGTAAACTAATAGAGGTAAAAAAATGATCCTAGATGCCAGTTATACATTATTAGTCGCATGTATCGCGCTACTCATAGGAATGTTTGTCGTAAAATTTACCCCGTTCCTACAAAAAAACCACATACCAGAAGCCGTCGTTGGTGGCTTTATTGTTGCAATTGTTCTGTTAATTATTGATAAAACATCAGGTTATTCGTTTACTTTTGATGCTTCATTGCAAAGTTTATTAATGCTCACATTCTTTTCCTCTATCGGGCTAAGTTCTGACTTTTCTCGACTGATTAAAGGAGGAAAGCCGTTAGTTCTATTAACTATTGCAGTAACGATCCTAATCGCCATTCAAAATACTGTCGGCATGAGTATGGCTGTCATGATGAATGAAAGTCCATTTATTGGCTTAATTGCAGGTTCAATTACTCTAACAGGTGGTCATGGTAATGCCGGAGCATGGGGCCCTATTCTCGCTGATAAATATGGTGTAACAGGCGCCGTTGAATTAGCGATGGCTTGTGCAACACTTGGATTAGTGTTGGGTGGTTTAGTTGGCGGCCCTGTTGCCCGTCATCTTTTGAAAAAGGTCTCTATTCCTAAAACAACCGAGCAAGAGCGCGACACTATCGTTGAAGCTTTTGAGCAACCAAGCGTCAAAAGAAAAATCAATGCAAATAACGTTATTGAAACCATTTCAATGCTGATTATCTGTATTGTTGTTGGTGGCTATATCAGTGCATTGTTTAAAGATACTTTTCTGCAACTGCCTACTTTTGTCTGGTGTTTATTTGTCGGTATTATTATCCGTAATACACTGACTCATGTATTTAAACACGAAGTGTTTGAGCCGACCGTCGATGTATTAGGTAGCGTTGCTTTATCGCTTTTCTTGGCAATGGCGTTAATGTCATTAAAATTTGGTCAATTGGCAAGCATGGCAGGGCCAGTATTAATTATCATTGCTGTACAAACTGTTGTCATGGTGCTATTTGCCTGCTTTGTCACCTTCAAAATGATGGGCAAAGATTATGATGCTGTCGTGATCAGCGCGGGTCACTGTGGCTTTGGTATGGGAGCAACACCAACAGCAATTGCGAATATGCAAACAGTCACAAAAGCATTTGGACCATCACATAAAGCTTTCCTTGTCGTTCCTATGGTCGGTGCCTTTATTGTTGATATTTCAAACAGTATCTTAATTAAAATATTTATTGAAATTGGTACATACTTTACCTAATAGCTACACACTACTCGGCGTACTTCTCCTAACAATTTATTATAGGGCAG