Homologs in group_1638

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10805 FBDBKF_10805 94.6 Morganella morganii S1 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
EHELCC_19395 EHELCC_19395 94.6 Morganella morganii S2 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
NLDBIP_14970 NLDBIP_14970 94.6 Morganella morganii S4 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
LHKJJB_14375 LHKJJB_14375 94.6 Morganella morganii S3 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
HKOGLL_12995 HKOGLL_12995 94.6 Morganella morganii S5 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
PMI_RS14325 PMI_RS14325 74.0 Proteus mirabilis HI4320 - ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_1638

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1638

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O34563 2.59e-34 128 34 5 214 2 glnH ABC transporter glutamine-binding protein GlnH Bacillus subtilis (strain 168)
P0AEM9 2.35e-33 125 32 4 251 1 tcyJ L-cystine-binding protein TcyJ Escherichia coli (strain K12)
P0AEN0 2.35e-33 125 32 4 251 3 tcyJ L-cystine-binding protein TcyJ Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P30860 2.03e-24 101 31 7 251 1 artJ ABC transporter arginine-binding protein 1 Escherichia coli (strain K12)
P30859 2.95e-24 100 27 2 249 1 artI Putative ABC transporter arginine-binding protein 2 Escherichia coli (strain K12)
P27676 2.22e-23 99 34 5 181 3 glnH Glutamine-binding protein Geobacillus stearothermophilus
Q9I402 4.27e-20 90 28 8 270 1 PA1342 L-glutamate/L-aspartate-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q06758 3.61e-19 87 28 7 226 3 hisJ Probable histidine-binding protein Neisseria gonorrhoeae
Q9ZF60 7.91e-19 87 29 7 265 3 gltI Glutamate/aspartate import solute-binding protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8RQL6 1.22e-18 86 28 8 252 3 gluB Glutamate-binding protein GluB Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
Q46125 1.47e-18 85 34 3 160 1 hisJ Probable histidine-binding protein Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
P48242 2.62e-17 83 27 8 252 1 gluB Glutamate-binding protein GluB Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
P0AEQ3 3.61e-17 82 29 3 213 1 glnH Glutamine-binding periplasmic protein Escherichia coli (strain K12)
P0AEQ4 3.61e-17 82 29 3 213 3 glnH Glutamine-binding periplasmic protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AEQ5 3.61e-17 82 29 3 213 3 glnH Glutamine-binding periplasmic protein Escherichia coli O157:H7
P37902 1.5e-16 81 28 7 245 1 gltI Glutamate/aspartate import solute-binding protein Escherichia coli (strain K12)
G3XD47 3.44e-16 79 30 8 229 1 aotJ L-arginine-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P42199 7.95e-15 75 28 8 248 1 tcyA L-cystine-binding protein TcyA Bacillus subtilis (strain 168)
A1VZQ4 1.74e-13 72 29 5 219 3 peb1A Major cell-binding factor Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176)
P09551 2.32e-13 71 25 7 263 1 argT Lysine/arginine/ornithine-binding periplasmic protein Escherichia coli (strain K12)
Q0P9X8 2.65e-13 71 29 5 219 1 peb1A Major cell-binding factor Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
P45024 4.27e-13 70 25 7 259 1 HI_1080 Probable amino-acid ABC transporter-binding protein HI_1080 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q52812 1.03e-12 70 27 8 240 1 aapJ General L-amino acid-binding periplasmic protein AapJ Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
Q9Z869 1.92e-12 68 27 9 231 1 artJ Probable ABC transporter arginine-binding protein ArtJ Chlamydia pneumoniae
P02911 8.05e-12 67 24 7 263 1 argT Lysine/arginine/ornithine-binding periplasmic protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q01269 1.17e-11 67 25 7 237 1 pheC Cyclohexadienyl dehydratase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P45091 2.83e-11 65 27 7 220 1 artI ABC transporter arginine-binding protein Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P49618 3.59e-11 65 26 7 234 3 lapT Arginine-binding periplasmic protein Mannheimia haemolytica
P54952 1.53e-10 63 24 6 239 1 yxeM Probable amino-acid-binding protein YxeM Bacillus subtilis (strain 168)
P0AEU0 2.07e-10 63 23 5 229 1 hisJ Histidine-binding periplasmic protein Escherichia coli (strain K12)
P0AEU1 2.07e-10 63 23 5 229 3 hisJ Histidine-binding periplasmic protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AEU2 2.07e-10 63 23 5 229 3 hisJ Histidine-binding periplasmic protein Escherichia coli O157:H7
P45766 2.22e-10 63 26 7 224 1 yhdW Putative amino-acid ABC transporter-binding protein YhdW Escherichia coli (strain K12)
P58068 3.82e-10 63 25 7 224 3 yhdW Putative amino-acid ABC transporter-binding protein YhdW Escherichia coli O157:H7
P52626 7.61e-10 61 25 6 233 3 patH Putative amino-acid ABC transporter-binding protein PatH Vibrio harveyi
P42400 9.51e-10 61 25 7 265 1 yckB Probable ABC transporter extracellular-binding protein YckB Bacillus subtilis (strain 168)
P02910 1.03e-09 61 23 6 230 1 hisJ Histidine-binding periplasmic protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P54535 1.42e-09 60 24 6 221 1 artP Arginine-binding extracellular protein ArtP Bacillus subtilis (strain 168)
P35120 4.68e-08 56 24 8 282 1 nocT Nopaline-binding periplasmic protein Agrobacterium fabrum (strain C58 / ATCC 33970)
A4SNZ5 4.7e-08 57 32 8 167 3 mltF Membrane-bound lytic murein transglycosylase F Aeromonas salmonicida (strain A449)
B1JDH3 8.73e-08 56 25 11 258 3 mltF Membrane-bound lytic murein transglycosylase F Pseudomonas putida (strain W619)
Q5QWY4 1.55e-07 55 25 11 266 3 mltF Membrane-bound lytic murein transglycosylase F Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)
Q5E750 2e-07 55 28 6 149 3 mltF Membrane-bound lytic murein transglycosylase F Aliivibrio fischeri (strain ATCC 700601 / ES114)
A7MSG2 3.58e-07 54 29 5 138 3 mltF Membrane-bound lytic murein transglycosylase F Vibrio campbellii (strain ATCC BAA-1116)
P39906 4.27e-07 53 25 8 217 3 aabA Amino-acid-binding protein AabA Dichelobacter nodosus
A0KJ50 5.08e-07 53 30 5 146 3 mltF Membrane-bound lytic murein transglycosylase F Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
Q9KTN5 6.93e-07 53 31 3 106 3 mltF Membrane-bound lytic murein transglycosylase F Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F353 6.93e-07 53 31 3 106 3 mltF Membrane-bound lytic murein transglycosylase F Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q87RW1 7.99e-07 53 28 5 137 3 mltF Membrane-bound lytic murein transglycosylase F Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q6LU25 1.59e-06 52 29 9 178 3 mltF Membrane-bound lytic murein transglycosylase F Photobacterium profundum (strain SS9)
Q2Y6L9 1.76e-06 52 24 7 226 3 mltF Membrane-bound lytic murein transglycosylase F Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71)
Q886W7 3.12e-06 51 23 8 254 3 mltF Membrane-bound lytic murein transglycosylase F Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
P72298 4.33e-06 50 24 9 298 3 occT Octopine-binding periplasmic protein Rhizobium meliloti
Q48LX4 4.82e-06 51 24 9 254 3 mltF Membrane-bound lytic murein transglycosylase F Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)
A1RHR2 9e-06 50 28 4 152 3 mltF Membrane-bound lytic murein transglycosylase F Shewanella sp. (strain W3-18-1)
A4Y8T1 9e-06 50 28 4 152 3 mltF Membrane-bound lytic murein transglycosylase F Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
A8ZWR8 9.03e-06 50 24 10 274 3 mltF Membrane-bound lytic murein transglycosylase F Desulfosudis oleivorans (strain DSM 6200 / JCM 39069 / Hxd3)
Q0HKV0 1.35e-05 49 28 4 152 3 mltF Membrane-bound lytic murein transglycosylase F Shewanella sp. (strain MR-4)
Q47XX8 1.66e-05 49 33 4 87 3 mltF Membrane-bound lytic murein transglycosylase F Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
Q3IHZ1 1.73e-05 49 36 3 80 3 mltF Membrane-bound lytic murein transglycosylase F Pseudoalteromonas translucida (strain TAC 125)
Q8ZPA3 2.11e-05 48 24 4 178 1 dalS ABC transporter D-alanine-binding periplasmic protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q0HX48 2.13e-05 48 28 4 152 3 mltF Membrane-bound lytic murein transglycosylase F Shewanella sp. (strain MR-7)
A9KWW4 2.18e-05 48 28 4 152 3 mltF Membrane-bound lytic murein transglycosylase F Shewanella baltica (strain OS195)
A6WQN7 2.18e-05 48 28 4 152 3 mltF Membrane-bound lytic murein transglycosylase F Shewanella baltica (strain OS185)
A3D6V0 2.18e-05 48 28 4 152 3 mltF Membrane-bound lytic murein transglycosylase F Shewanella baltica (strain OS155 / ATCC BAA-1091)
A0KUK5 2.2e-05 48 28 4 152 3 mltF Membrane-bound lytic murein transglycosylase F Shewanella sp. (strain ANA-3)
P55659 2.65e-05 48 27 4 132 3 NGR_a01540 Probable amino-acid ABC transporter periplasmic-binding protein y4tE Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q2NS21 2.88e-05 48 25 7 198 3 mltF Membrane-bound lytic murein transglycosylase F Sodalis glossinidius (strain morsitans)
P0A4F8 3.75e-05 47 30 2 107 1 occT Octopine-binding periplasmic protein Rhizobium radiobacter
P0A4F9 3.75e-05 47 30 2 107 3 occT Octopine-binding periplasmic protein Agrobacterium tumefaciens (strain Ach5)
O84385 3.86e-05 47 25 5 141 1 artJ Probable ABC transporter arginine-binding protein ArtJ Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
A5VZC8 4.29e-05 48 23 10 241 3 mltF Membrane-bound lytic murein transglycosylase F Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1)
Q88P17 4.77e-05 48 23 10 241 3 mltF Membrane-bound lytic murein transglycosylase F Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
A1S850 5.65e-05 47 30 3 103 3 mltF Membrane-bound lytic murein transglycosylase F Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
Q1I5L3 6.43e-05 47 24 11 256 3 mltF Membrane-bound lytic murein transglycosylase F Pseudomonas entomophila (strain L48)
Q4ZX03 9.49e-05 47 23 9 254 3 mltF Membrane-bound lytic murein transglycosylase F Pseudomonas syringae pv. syringae (strain B728a)
B0KRE9 0.000101 47 23 11 256 3 mltF Membrane-bound lytic murein transglycosylase F Pseudomonas putida (strain GB-1)
Q7MN72 0.000177 46 33 3 87 3 mltF Membrane-bound lytic murein transglycosylase F Vibrio vulnificus (strain YJ016)
Q8DF80 0.000177 46 33 3 87 3 mltF Membrane-bound lytic murein transglycosylase F Vibrio vulnificus (strain CMCP6)
B2VEB4 0.000194 46 25 9 196 3 mltF Membrane-bound lytic murein transglycosylase F Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
P16575 0.00051 45 23 10 235 1 bvgS Virulence sensor protein BvgS Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
Q02RN8 0.000638 44 25 10 255 3 mltF Membrane-bound lytic murein transglycosylase F Pseudomonas aeruginosa (strain UCBPP-PA14)
Q8EC56 0.000812 44 26 8 166 3 mltF Membrane-bound lytic murein transglycosylase F Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14490
Feature type CDS
Gene -
Product ABC transporter substrate-binding protein
Location 127112 - 127945 (strand: 1)
Length 834 (nucleotides) / 277 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1638
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00497 Bacterial extracellular solute-binding proteins, family 3

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0834 Amino acid transport and metabolism (E)
Signal transduction mechanisms (T)		 ET ABC-type amino acid transport/signal transduction system, periplasmic component/domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02030 polar amino acid transport system substrate-binding protein - -

Protein Sequence

MKPTNFVPALLAGLALVSGAAQADKLDDIQKAGVIRISVFDSNPPFGFIDPQTKKLAGYDVDIAQAVADDLGVKLELRPTNPANRIPLLVSGKVDLIGANFTITDERAKQVDFSIPDFQTGQKFIARKGVLKTPDDVAKLRIGADKGTVQEVTLREKFPGTKVISYDDTPLAFAALRNGNVDAITQDDAKLVGLLGNLPDAVKAEFELSPFSLTREYQALAAPKGEARLVEAVNKTLTKLESDGKSQQIYNQWFGPGTKAEQPRGDFKFGPLENQQK

Flanking regions ( +/- flanking 50bp)

AGTGTGATTTACACTAATTGACGTTATCTCAGACTGATTCAGGGGTGTGTATGAAACCGACCAATTTTGTTCCGGCACTGCTTGCCGGTTTAGCATTAGTAAGTGGTGCCGCGCAGGCTGACAAGCTTGATGACATTCAGAAAGCCGGTGTTATCCGCATTTCGGTTTTTGACAGCAACCCGCCATTCGGATTTATTGATCCGCAGACTAAAAAACTTGCCGGTTATGATGTGGATATCGCACAGGCGGTAGCAGATGACTTAGGTGTGAAACTCGAACTTCGCCCGACTAACCCGGCAAACCGCATTCCGCTGCTGGTGTCCGGCAAAGTGGATTTAATCGGTGCTAACTTTACTATCACCGATGAGCGCGCCAAACAGGTGGATTTCTCTATTCCTGATTTCCAGACCGGACAAAAATTTATTGCCCGCAAAGGTGTGCTGAAAACGCCTGATGATGTAGCAAAACTGCGTATCGGTGCGGATAAAGGCACGGTTCAGGAAGTGACTCTGCGGGAGAAATTCCCGGGCACAAAAGTCATCTCTTATGATGATACGCCGCTGGCATTTGCAGCACTGCGTAATGGTAACGTAGATGCTATCACGCAGGATGATGCCAAACTGGTCGGGTTGCTGGGCAACCTGCCGGACGCGGTTAAAGCAGAGTTTGAACTCTCTCCGTTCAGCCTGACCCGTGAATACCAGGCGCTGGCAGCACCAAAAGGGGAAGCCCGTCTGGTGGAAGCCGTGAACAAAACACTGACAAAACTGGAAAGTGACGGCAAATCACAGCAGATTTATAACCAGTGGTTTGGTCCCGGCACCAAAGCAGAACAGCCACGCGGTGACTTTAAATTTGGTCCGCTGGAAAACCAGCAAAAATAAGAGTGTAGTTGCATATAATGAAGCCTCACCCCGGTGAGGCTTCAGGCGTT