Orthogroup:group_1680


Homologs in group_1680

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_11725 FBDBKF_11725 Morganella morganii S1 efeO Iron uptake system EfeUOB, periplasmic (or lipoprotein) component EfeO/EfeM
EHELCC_17645 EHELCC_17645 Morganella morganii S2 efeO Iron uptake system EfeUOB, periplasmic (or lipoprotein) component EfeO/EfeM
NLDBIP_19315 NLDBIP_19315 Morganella morganii S4 efeO Iron uptake system EfeUOB, periplasmic (or lipoprotein) component EfeO/EfeM
LHKJJB_18085 LHKJJB_18085 Morganella morganii S3 efeO Iron uptake system EfeUOB, periplasmic (or lipoprotein) component EfeO/EfeM
HKOGLL_18995 HKOGLL_18995 Morganella morganii S5 efeO Iron uptake system EfeUOB, periplasmic (or lipoprotein) component EfeO/EfeM
F4V73_RS07970 F4V73_RS07970 Morganella psychrotolerans - EfeM/EfeO family lipoprotein
PMI_RS00840 PMI_RS00840 Proteus mirabilis HI4320 - EfeM/EfeO family lipoprotein

Distribution of group_1680 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1680 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1680

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1680.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 efeO 5
2 - 2

Product

# Product Occurence
1 Iron uptake system EfeUOB, periplasmic (or lipoprotein) component EfeO/EfeM 5
2 EfeM/EfeO family lipoprotein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2822 7 P Inorganic ion transport and metabolism (P) Iron uptake system EfeUOB, periplasmic (or lipoprotein) component EfeO/EfeM

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07224 6 iron uptake system component EfeO - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF09375 7 Imelysin

Annotations of the 27 SwissProt hits

Annotation Number of occurrences
Efem/EfeO family lipoprotein 10
Efem/EfeO family lipoprotein NMB0035 1
Iron uptake system component EfeM 2
Iron uptake system component EfeO 14

Protein length

Min length 299
Max length 307
Mean length (sd) 300.3 (3.0)
Median length 299.0

Protein length distribution