Homologs in group_1611

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10580 FBDBKF_10580 95.3 Morganella morganii S1 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
EHELCC_14915 EHELCC_14915 95.3 Morganella morganii S2 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
NLDBIP_14745 NLDBIP_14745 95.3 Morganella morganii S4 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
LHKJJB_14600 LHKJJB_14600 95.3 Morganella morganii S3 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
HKOGLL_13220 HKOGLL_13220 95.3 Morganella morganii S5 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
PMI_RS10580 PMI_RS10580 52.6 Proteus mirabilis HI4320 - bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase

Distribution of the homologs in the orthogroup group_1611

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1611

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P44480 2.77e-96 282 64 0 207 1 eda Putative KHG/KDPG aldolase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O83578 4.18e-57 182 47 0 200 3 eda Putative KHG/KDPG aldolase Treponema pallidum (strain Nichols)
P38448 8.15e-54 174 43 0 191 3 eda KHG/KDPG aldolase Dickeya dadantii (strain 3937)
P00885 4.29e-51 167 42 0 192 1 eda 2-dehydro-3-deoxy-phosphogluconate aldolase Pseudomonas putida
O68283 1.25e-50 166 39 1 212 3 eda 2-dehydro-3-deoxy-phosphogluconate aldolase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0A958 5.28e-49 162 41 0 186 3 eda KHG/KDPG aldolase Shigella flexneri
P0A955 5.28e-49 162 41 0 186 1 eda KHG/KDPG aldolase Escherichia coli (strain K12)
P0A956 5.28e-49 162 41 0 186 3 eda KHG/KDPG aldolase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A957 5.28e-49 162 41 0 186 3 eda KHG/KDPG aldolase Escherichia coli O157:H7
Q15X88 2.3e-48 160 38 0 196 1 Patl_0974 2-dehydro-3-deoxy-phosphogluconate aldolase Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)
Q00384 1.23e-44 150 41 2 199 1 eda KHG/KDPG aldolase Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
P50846 2.3e-27 105 35 3 165 2 kdgA KHG/KDPG aldolase Bacillus subtilis (strain 168)
Q92RN8 1.15e-09 59 30 5 171 3 dgoA Probable 2-dehydro-3-deoxy-6-phosphogalactonate aldolase Rhizobium meliloti (strain 1021)
Q6BF16 9.5e-09 56 27 7 186 1 dgoA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14290
Feature type CDS
Gene -
Product bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
Location 78949 - 79584 (strand: 1)
Length 636 (nucleotides) / 211 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1611
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01081 KDPG and KHG aldolase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0800 Carbohydrate transport and metabolism (G) G 2-keto-3-deoxy-6-phosphogluconate aldolase

Kegg Ortholog Annotation(s)

Protein Sequence

MSELQAMIARFRQLKIVPVIAVEQAEDIIPLGHALADNGLPVAEITFRTECAAEAIKLLREARPDMLVGAGTVINREQVRQAKAAGAQFVVSPGLNPNTVQACQQMDILIVPGINNPSAVEQALELGINFVKFFPAEPSGGIPMIKAMLAPYHQLQVMPTGGIGLNNIRDYLAIPQIVACGGSWMVPASLIKAKNWAEIGRLAREASEFVK

Flanking regions ( +/- flanking 50bp)

CTGATACTTTATTTACTCACTCTCTTTAACGGGAGAAGCAGGAGAATATGATGTCCGAATTACAGGCAATGATAGCCCGTTTCCGTCAGCTGAAAATTGTACCGGTTATCGCGGTTGAACAGGCTGAAGATATTATTCCGCTGGGTCATGCACTGGCAGATAATGGTCTGCCGGTGGCAGAAATTACCTTCCGTACAGAGTGTGCGGCAGAAGCCATAAAACTGCTGCGCGAAGCACGCCCGGATATGCTGGTGGGCGCAGGGACAGTGATCAATCGCGAGCAGGTGCGCCAGGCAAAAGCTGCCGGTGCGCAGTTTGTTGTCTCTCCGGGACTGAACCCGAATACTGTGCAGGCATGTCAGCAGATGGATATCCTGATTGTTCCGGGCATTAATAACCCGAGCGCTGTTGAACAGGCGCTGGAACTGGGTATTAATTTTGTGAAATTCTTCCCGGCGGAGCCGTCAGGTGGTATCCCGATGATCAAAGCCATGCTGGCGCCGTATCATCAGTTGCAGGTAATGCCTACCGGCGGTATCGGGCTGAATAATATCCGCGACTATCTGGCTATCCCGCAGATTGTGGCGTGCGGTGGCTCCTGGATGGTGCCCGCATCACTGATTAAAGCAAAAAACTGGGCGGAAATCGGCAGACTTGCCCGCGAAGCCAGTGAGTTTGTGAAGTAATTTCCTTGTGTTATCCGGTGGCGGGATGTGTATCTCCTGCCACTGTTCTT