Homologs in group_1611

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10580 FBDBKF_10580 100.0 Morganella morganii S1 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
EHELCC_14915 EHELCC_14915 100.0 Morganella morganii S2 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
NLDBIP_14745 NLDBIP_14745 100.0 Morganella morganii S4 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
LHKJJB_14600 LHKJJB_14600 100.0 Morganella morganii S3 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
F4V73_RS14290 F4V73_RS14290 95.3 Morganella psychrotolerans - bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
PMI_RS10580 PMI_RS10580 52.6 Proteus mirabilis HI4320 - bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase

Distribution of the homologs in the orthogroup group_1611

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1611

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P44480 5.86e-97 283 64 0 207 1 eda Putative KHG/KDPG aldolase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O83578 3.08e-59 187 48 1 207 3 eda Putative KHG/KDPG aldolase Treponema pallidum (strain Nichols)
P38448 1.15e-55 179 44 0 191 3 eda KHG/KDPG aldolase Dickeya dadantii (strain 3937)
P00885 6.93e-53 172 43 0 192 1 eda 2-dehydro-3-deoxy-phosphogluconate aldolase Pseudomonas putida
O68283 3.29e-52 170 41 0 200 3 eda 2-dehydro-3-deoxy-phosphogluconate aldolase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0A958 3.99e-51 167 43 0 186 3 eda KHG/KDPG aldolase Shigella flexneri
P0A955 3.99e-51 167 43 0 186 1 eda KHG/KDPG aldolase Escherichia coli (strain K12)
P0A956 3.99e-51 167 43 0 186 3 eda KHG/KDPG aldolase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A957 3.99e-51 167 43 0 186 3 eda KHG/KDPG aldolase Escherichia coli O157:H7
Q15X88 3.39e-48 160 39 0 196 1 Patl_0974 2-dehydro-3-deoxy-phosphogluconate aldolase Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)
Q00384 9.6e-45 150 42 2 199 1 eda KHG/KDPG aldolase Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
P50846 9.87e-28 107 34 3 172 2 kdgA KHG/KDPG aldolase Bacillus subtilis (strain 168)
Q92RN8 5.09e-08 54 29 5 166 3 dgoA Probable 2-dehydro-3-deoxy-6-phosphogalactonate aldolase Rhizobium meliloti (strain 1021)
Q6BF16 9.22e-08 53 26 6 182 1 dgoA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_13220
Feature type CDS
Gene eda
Product 2-keto-3-deoxy-6-phosphogluconate aldolase
Location 64624 - 65259 (strand: -1)
Length 636 (nucleotides) / 211 (amino acids)

Contig

Accession ZDB_691
Length 141725 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1611
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01081 KDPG and KHG aldolase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0800 Carbohydrate transport and metabolism (G) G 2-keto-3-deoxy-6-phosphogluconate aldolase

Kegg Ortholog Annotation(s)

Protein Sequence

MSELQAMITRFRQLKIVPVIAVDNAEDIIPLGNALADNGLPVAEITFRTECAAEAIKLLREARPDMLVGAGTVINREQVRQAKAAGAQFVVSPGLNPNTVQACQQIDIPIVPGINNPSAVEQALELGIDFVKFFPAEPSGGIPMIKAMLAPYHQLQVMPTGGIGLNNIRDYLAIPQIVACGGSWMVPASLIKAKDWAAIGKLAREASEFVK

Flanking regions ( +/- flanking 50bp)

ACTGATACTTTACTGAATAACACGTTTTAACGGGAAAAGAGGAGAACGAGATGTCCGAATTACAGGCAATGATTACCCGTTTCCGGCAGCTGAAAATTGTGCCGGTGATCGCCGTGGATAACGCGGAAGATATTATCCCGTTAGGCAATGCGCTGGCGGACAACGGTCTGCCGGTGGCGGAAATCACTTTCCGTACTGAGTGTGCGGCAGAAGCGATCAAACTGCTGCGCGAAGCCCGTCCGGATATGCTGGTGGGCGCGGGAACCGTGATTAACCGCGAGCAGGTGCGTCAGGCGAAAGCCGCCGGGGCGCAGTTTGTCGTCTCTCCCGGTCTGAACCCGAACACCGTGCAGGCGTGTCAGCAGATTGATATCCCGATTGTTCCGGGGATCAACAACCCGAGCGCGGTTGAGCAGGCTCTGGAGCTGGGCATCGATTTTGTGAAATTCTTCCCGGCAGAGCCGTCAGGCGGTATTCCGATGATCAAAGCCATGCTGGCGCCGTATCACCAGTTACAGGTGATGCCGACCGGTGGTATCGGGCTGAACAATATCCGCGACTATCTGGCTATCCCGCAGATTGTGGCCTGCGGCGGTTCATGGATGGTTCCGGCTTCGCTTATCAAAGCAAAAGACTGGGCAGCCATCGGTAAACTGGCGCGTGAAGCCAGTGAGTTTGTGAAGTAAGGATTTTTTACCGTTCCGGCAGCAGATCCCCTCTCTGCTGCCGTATTATC