Homologs in group_1611

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10580 FBDBKF_10580 52.6 Morganella morganii S1 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
EHELCC_14915 EHELCC_14915 52.6 Morganella morganii S2 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
NLDBIP_14745 NLDBIP_14745 52.6 Morganella morganii S4 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
LHKJJB_14600 LHKJJB_14600 52.6 Morganella morganii S3 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
HKOGLL_13220 HKOGLL_13220 52.6 Morganella morganii S5 eda 2-keto-3-deoxy-6-phosphogluconate aldolase
F4V73_RS14290 F4V73_RS14290 52.6 Morganella psychrotolerans - bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase

Distribution of the homologs in the orthogroup group_1611

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1611

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P44480 1.07e-72 222 49 0 207 1 eda Putative KHG/KDPG aldolase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O83578 2.64e-56 180 47 0 190 3 eda Putative KHG/KDPG aldolase Treponema pallidum (strain Nichols)
P38448 2.6e-45 152 39 0 196 3 eda KHG/KDPG aldolase Dickeya dadantii (strain 3937)
O68283 6.38e-43 146 37 1 195 3 eda 2-dehydro-3-deoxy-phosphogluconate aldolase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0A958 9.6e-42 143 42 0 176 3 eda KHG/KDPG aldolase Shigella flexneri
P0A955 9.6e-42 143 42 0 176 1 eda KHG/KDPG aldolase Escherichia coli (strain K12)
P0A956 9.6e-42 143 42 0 176 3 eda KHG/KDPG aldolase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A957 9.6e-42 143 42 0 176 3 eda KHG/KDPG aldolase Escherichia coli O157:H7
Q15X88 4.7e-40 139 39 0 191 1 Patl_0974 2-dehydro-3-deoxy-phosphogluconate aldolase Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)
P00885 2.03e-37 132 36 0 185 1 eda 2-dehydro-3-deoxy-phosphogluconate aldolase Pseudomonas putida
Q00384 6.72e-36 128 38 1 181 1 eda KHG/KDPG aldolase Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
P50846 3.95e-27 105 34 3 193 2 kdgA KHG/KDPG aldolase Bacillus subtilis (strain 168)
Q92RN8 1.23e-08 56 28 4 164 3 dgoA Probable 2-dehydro-3-deoxy-6-phosphogalactonate aldolase Rhizobium meliloti (strain 1021)
Q6BF16 2.76e-08 55 23 5 171 1 dgoA 2-dehydro-3-deoxy-6-phosphogalactonate aldolase Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10580
Feature type CDS
Gene -
Product bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
Location 2327828 - 2328466 (strand: 1)
Length 639 (nucleotides) / 212 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1611
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01081 KDPG and KHG aldolase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0800 Carbohydrate transport and metabolism (G) G 2-keto-3-deoxy-6-phosphogluconate aldolase

Kegg Ortholog Annotation(s)

Protein Sequence

MRQSIVDTLSVLKVIPVIQINRAEDAIWLGEILTQNQLPIAEITFRTPAAAKAIKLMREHFPELILCAGTVLTAQQADIAKEAGASFVISPGYNPKTVDYCLHNGIDIVPGINNPSQIEVALERGLTLLKFFPAEASGGVKMLKAMAAPYSQVQFMPTGGISLNNVSDYLAIGQVIACGGSWIATTEAIDNQDKQTIARNIQNIHSLLKNKG

Flanking regions ( +/- flanking 50bp)

TATTCCCCATAACATCACTGATTCATTCTATTCACTCATCAAGGATAACCATGAGACAGTCAATTGTTGATACACTTTCAGTACTGAAAGTGATCCCCGTGATCCAAATTAATCGCGCCGAAGATGCAATTTGGCTGGGTGAAATACTAACCCAAAATCAATTACCTATTGCTGAAATTACCTTTCGTACTCCAGCAGCCGCCAAAGCAATAAAGCTGATGAGAGAACACTTTCCTGAGCTTATTCTTTGTGCGGGTACCGTATTAACAGCGCAACAAGCTGATATAGCAAAAGAAGCGGGTGCAAGCTTTGTTATTTCTCCCGGTTATAATCCAAAAACCGTCGATTATTGCCTTCATAATGGCATTGATATTGTGCCTGGAATAAATAACCCAAGCCAAATTGAAGTTGCTCTTGAGCGGGGTTTAACCTTGCTAAAATTTTTCCCAGCAGAAGCTTCTGGTGGAGTAAAAATGCTAAAAGCAATGGCGGCACCTTACTCTCAAGTTCAATTTATGCCTACTGGAGGAATTAGTCTAAACAATGTTAGTGATTACCTCGCTATCGGGCAAGTTATCGCATGTGGTGGCAGTTGGATTGCTACTACTGAGGCAATTGATAATCAAGACAAACAGACTATTGCTCGCAATATTCAAAATATCCATTCATTACTTAAGAATAAAGGATAAACAAAATGAAACAGGTTGCCGTTTTATTGGCTGATGGTTTTGAAGAAGGT