Homologs in group_178

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03960 FBDBKF_03960 30.4 Morganella morganii S1 taaP trimeric autotransporter adhesin TaaP
EHELCC_06575 EHELCC_06575 30.4 Morganella morganii S2 taaP trimeric autotransporter adhesin TaaP
NLDBIP_06900 NLDBIP_06900 30.4 Morganella morganii S4 taaP trimeric autotransporter adhesin TaaP
LHKJJB_06435 LHKJJB_06435 30.4 Morganella morganii S3 taaP trimeric autotransporter adhesin TaaP
HKOGLL_04495 HKOGLL_04495 30.4 Morganella morganii S5 taaP trimeric autotransporter adhesin TaaP
F4V73_RS10220 F4V73_RS10220 37.2 Morganella psychrotolerans - YadA-like family protein
PMI_RS10460 PMI_RS10460 30.8 Proteus mirabilis HI4320 aipA trimeric autotransporter adhesin AipA
PMI_RS12715 PMI_RS12715 30.4 Proteus mirabilis HI4320 taaP trimeric autotransporter adhesin TaaP

Distribution of the homologs in the orthogroup group_178

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_178

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P31489 1.36e-12 72 28 10 252 1 yadA Adhesin YadA Yersinia enterocolitica
P0C2W0 1.6e-10 65 27 9 225 1 yadA Adhesin YadA Yersinia enterocolitica
A1JUB7 1.83e-10 65 26 8 222 1 yadA Adhesin YadA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
P10858 1.94e-10 65 29 9 203 1 yadA Adhesin YadA Yersinia pseudotuberculosis serotype I (strain IP32953)
Q2T6X7 4.81e-05 48 31 2 94 1 bimA Autotransporter BimA Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14140
Feature type CDS
Gene -
Product YadA-like family protein
Location 41434 - 42516 (strand: -1)
Length 1083 (nucleotides) / 360 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_178
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF03895 YadA-like membrane anchor domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5295 Intracellular trafficking, secretion, and vesicular transport (U)
Extracellular structures (W)		 UW Autotransporter adhesin

Protein Sequence

MKTINKSLVILLLSIISPSVFSADETDNKIQAAKDDAIRRSNNYTDSKISSSNTMIGADINKAKNTAISESNSYTDKTITDKTRDLGATINKAQLNAIQISTGYADMKAVTIGHDIDSAKTDAVTQSNTYTDKQAADAKSEAITTSNTYSDKQAADAKSEAVTTSKTYTDKQAADAKSEAVSTSKTYTDKQTADAKSEAVSTSKTYTDKQVTKVSATIDSAKSEAITTSNTYTDKKVSNINTTIDNSRVSAINTSNHYTNNRVSELETRMDNKFSSVERQLDKNSDRANAGIASVAAMANIPYISDKTFSMGLGAGNYRNGNAVAFGGQYSIDGNVNIRSSVSWNNEDSAVYGAGIAVGF

Flanking regions ( +/- flanking 50bp)

ACATAAAAGCTGACGGTGTGTTTCTAATTTAAATTACCGAGAAAACCTGCATGAAAACTATTAATAAATCATTAGTAATATTATTATTATCAATAATATCACCGTCTGTTTTTTCTGCTGATGAAACAGATAATAAAATACAAGCAGCAAAAGACGATGCTATAAGAAGAAGCAACAACTATACTGATAGTAAGATAAGTTCAAGCAACACTATGATTGGGGCAGATATTAATAAAGCTAAAAATACAGCTATTTCAGAAAGTAACAGTTATACAGATAAAACAATCACTGATAAAACCCGTGATCTGGGCGCAACAATTAATAAAGCTCAACTTAACGCAATTCAAATAAGTACAGGTTATGCGGATATGAAGGCCGTTACCATCGGGCATGACATCGATAGCGCAAAAACAGATGCTGTAACACAAAGCAATACCTATACTGATAAACAGGCTGCTGACGCTAAGTCTGAGGCTATCACCACAAGCAACACATATTCTGATAAACAGGCCGCTGACGCTAAGTCTGAGGCTGTCACCACAAGCAAGACGTATACTGATAAACAGGCCGCTGACGCTAAATCTGAGGCTGTCAGCACAAGCAAGACGTATACTGATAAACAGACCGCTGACGCTAAGTCTGAGGCTGTCAGCACAAGCAAAACGTATACTGATAAACAGGTCACTAAAGTCAGTGCGACTATTGATAGCGCTAAATCTGAAGCCATCACCACAAGCAATACCTATACTGATAAAAAAGTCAGTAATATCAACACAACAATTGATAATTCCAGAGTAAGCGCGATCAACACCAGCAATCATTATACAAATAACAGAGTTAGTGAGCTTGAAACCCGGATGGATAATAAATTCAGCTCTGTTGAAAGGCAGCTTGATAAAAACTCTGACCGTGCAAATGCCGGTATTGCATCTGTTGCCGCGATGGCTAATATTCCGTATATCAGTGACAAGACATTCAGTATGGGATTGGGTGCAGGAAATTACCGCAACGGAAATGCTGTCGCGTTTGGTGGTCAGTACAGTATTGATGGTAATGTTAATATCCGCAGCTCAGTCAGCTGGAATAATGAAGACAGCGCCGTTTATGGTGCCGGTATTGCCGTCGGATTCTGAGTTTTAAAAAGTAATAGTCCATAAAAAAGCGCCGATTGGCGCTTTTTTAT