Orthogroup:group_178


Homologs in group_178

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03960 FBDBKF_03960 Morganella morganii S1 taaP trimeric autotransporter adhesin TaaP
EHELCC_06575 EHELCC_06575 Morganella morganii S2 taaP trimeric autotransporter adhesin TaaP
NLDBIP_06900 NLDBIP_06900 Morganella morganii S4 taaP trimeric autotransporter adhesin TaaP
LHKJJB_06435 LHKJJB_06435 Morganella morganii S3 taaP trimeric autotransporter adhesin TaaP
HKOGLL_04495 HKOGLL_04495 Morganella morganii S5 taaP trimeric autotransporter adhesin TaaP
F4V73_RS10220 F4V73_RS10220 Morganella psychrotolerans - YadA-like family protein
F4V73_RS14140 F4V73_RS14140 Morganella psychrotolerans - YadA-like family protein
PMI_RS10460 PMI_RS10460 Proteus mirabilis HI4320 aipA trimeric autotransporter adhesin AipA
PMI_RS12715 PMI_RS12715 Proteus mirabilis HI4320 taaP trimeric autotransporter adhesin TaaP

Distribution of group_178 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_178 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_178

Orthogroup content: 9 members

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This page summarizes the annotation of all members of the orthologous group group_178.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 taaP 6
2 - 2
3 aipA 1

Product

# Product Occurence
1 trimeric autotransporter adhesin TaaP 6
2 YadA-like family protein 2
3 trimeric autotransporter adhesin AipA 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG5295 9 UW Intracellular trafficking, secretion, and vesicular transport (U)
Extracellular structures (W)		 Autotransporter adhesin

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03895 8 YadA-like membrane anchor domain
PF05658 8 YadA head domain repeat (2 copies)
PF05662 7 Coiled stalk of trimeric autotransporter adhesin

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG042332 1 trimeric autotransporter adhesin AipA VF1293 Effector delivery system
VFG042334 6 trimeric autotransporter adhesin TaaP VF1294 Effector delivery system

Annotations of the 15 SwissProt hits

Annotation Number of occurrences
Adhesin YadA 4
Autotransporter BimA 1
Autotransporter adhesin BadA 1
Autotransporter adhesin BpaC 2
Autotransporter adhesin BtaE 1
Autotransporter adhesin EhaG 1
Autotransporter adhesin SadA 1
Autotransporter adhesin UpaG 1
Immunoglobulin-binding protein EibC 1
Immunoglobulin-binding protein EibD 1
Immunoglobulin-binding protein EibE 1

Protein length

Min length 251
Max length 741
Mean length (sd) 592.6 (224.5)
Median length 741.0

Protein length distribution