Homologs in group_3093

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18915 FBDBKF_18915 86.8 Morganella morganii S1 cobB cobyrinate a,c-diamide synthase
EHELCC_17110 EHELCC_17110 86.8 Morganella morganii S2 cobB cobyrinate a,c-diamide synthase
NLDBIP_18490 NLDBIP_18490 86.8 Morganella morganii S4 cobB cobyrinate a,c-diamide synthase
LHKJJB_09135 LHKJJB_09135 86.8 Morganella morganii S3 cobB cobyrinate a,c-diamide synthase
HKOGLL_08685 HKOGLL_08685 86.8 Morganella morganii S5 cobB cobyrinate a,c-diamide synthase

Distribution of the homologs in the orthogroup group_3093

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3093

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P29946 0.0 579 61 1 458 1 cbiA Cobyrinate a,c-diamide synthase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q720N8 2.98e-170 489 53 5 455 3 cbiA Cobyrinate a,c-diamide synthase Listeria monocytogenes serotype 4b (strain F2365)
Q8Y7T0 1.39e-169 487 52 5 455 3 cbiA Cobyrinate a,c-diamide synthase Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Q92CL7 5.98e-169 486 51 5 459 3 cbiA Cobyrinate a,c-diamide synthase Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
A3CL56 3.75e-153 445 49 5 451 3 cbiA Cobyrinate a,c-diamide synthase Streptococcus sanguinis (strain SK36)
B2G9J4 1.26e-130 388 45 7 450 3 cbiA Cobyrinate a,c-diamide synthase Limosilactobacillus reuteri subsp. reuteri (strain JCM 1112)
A5VM87 1.26e-130 388 45 7 450 3 cbiA Cobyrinate a,c-diamide synthase Limosilactobacillus reuteri (strain DSM 20016)
O87698 3.96e-114 346 40 5 448 3 cbiA Cobyrinate a,c-diamide synthase Priestia megaterium
P73002 2.23e-112 342 41 7 443 3 cbiA Cobyrinate a,c-diamide synthase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q8RCP4 4.69e-109 333 40 8 456 3 cbiA Cobyrinate a,c-diamide synthase Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
Q3ZA71 1.13e-108 332 40 6 459 3 cbiA Cobyrinate a,c-diamide synthase Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195)
Q3ZWJ9 2.62e-107 328 40 6 463 3 cbiA Cobyrinate a,c-diamide synthase Dehalococcoides mccartyi (strain CBDB1)
Q97JB1 7.89e-107 327 40 7 445 3 cbiA Cobyrinate a,c-diamide synthase Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q9KBM8 7.58e-106 325 39 3 447 3 cbiA Cobyrinate a,c-diamide synthase Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q897K3 1.6e-105 323 41 8 437 3 cbiA Cobyrinate a,c-diamide synthase Clostridium tetani (strain Massachusetts / E88)
Q8TK00 1.1e-104 323 39 9 458 1 cbiA Cobyrinate a,c-diamide synthase Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
Q8R659 4.14e-103 317 38 9 459 3 cbiA Cobyrinate a,c-diamide synthase Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355)
Q46FL0 6.04e-102 316 38 10 460 1 cbiA Cobyrinate a,c-diamide synthase Methanosarcina barkeri (strain Fusaro / DSM 804)
Q5MZU1 1.1e-101 314 41 5 448 3 cbiA Cobyrinate a,c-diamide synthase Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q7NF32 8.79e-101 311 42 8 435 3 cbiA Cobyrinate a,c-diamide synthase Gloeobacter violaceus (strain ATCC 29082 / PCC 7421)
Q75FQ8 9.75e-101 311 36 6 446 3 cbiA Cobyrinate a,c-diamide synthase Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)
Q8EXQ4 1.33e-100 311 36 6 446 3 cbiA Cobyrinate a,c-diamide synthase Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
A1AT17 4.55e-100 310 40 8 457 3 cbiA Cobyrinate a,c-diamide synthase Pelobacter propionicus (strain DSM 2379 / NBRC 103807 / OttBd1)
O27509 9.64e-100 309 37 7 443 3 cbiA Cobyrinate a,c-diamide synthase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Q58816 1.06e-99 308 38 9 440 3 cbiA Cobyrinate a,c-diamide synthase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q6L2V8 1.52e-99 308 37 8 445 3 cbiA Cobyrinate a,c-diamide synthase Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828 / KAW 2/3)
A5UMJ2 3.72e-99 307 36 8 454 3 cbiA Cobyrinate a,c-diamide synthase Methanobrevibacter smithii (strain ATCC 35061 / DSM 861 / OCM 144 / PS)
Q9RJ16 4.96e-99 308 37 7 483 3 cobB Hydrogenobyrinate a,c-diamide synthase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q2NHQ3 1.34e-96 301 37 7 443 3 cbiA Cobyrinate a,c-diamide synthase Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3)
A4FW46 1.52e-96 300 37 9 445 3 cbiA Cobyrinate a,c-diamide synthase Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
O28054 2.17e-96 300 38 5 434 3 cbiA Cobyrinate a,c-diamide synthase Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q97BP4 3.27e-96 300 39 9 441 3 cbiA Cobyrinate a,c-diamide synthase Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
A6VH63 1.85e-94 295 37 9 445 3 cbiA Cobyrinate a,c-diamide synthase Methanococcus maripaludis (strain C7 / ATCC BAA-1331)
Q3A7A3 2.78e-94 295 39 5 458 3 cbiA Cobyrinate a,c-diamide synthase Syntrophotalea carbinolica (strain DSM 2380 / NBRC 103641 / GraBd1)
A6UQC1 4.33e-93 291 36 10 447 3 cbiA Cobyrinate a,c-diamide synthase Methanococcus vannielii (strain ATCC 35089 / DSM 1224 / JCM 13029 / OCM 148 / SB)
Q9HIX6 3.66e-89 281 36 10 450 3 cbiA Cobyrinate a,c-diamide synthase Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
Q98KP1 1.05e-86 275 36 6 437 3 cobB Hydrogenobyrinate a,c-diamide synthase Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
Q980B1 1.72e-86 274 35 8 436 3 cbiA Cobyrinate a,c-diamide synthase Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
A4G3R1 3.58e-84 268 34 10 457 3 cbiA Cobyrinate a,c-diamide synthase Herminiimonas arsenicoxydans
P9WP97 1.97e-83 267 36 10 454 1 cobB Hydrogenobyrinate a,c-diamide synthase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP96 1.97e-83 267 36 10 454 3 cobB Hydrogenobyrinate a,c-diamide synthase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P63836 1.97e-83 267 36 10 454 3 cobB Hydrogenobyrinate a,c-diamide synthase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
A0L8B9 7.02e-83 266 35 8 448 3 cbiA Cobyrinate a,c-diamide synthase Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1)
Q8UBQ8 1.33e-81 261 36 5 397 3 cobB Hydrogenobyrinate a,c-diamide synthase Agrobacterium fabrum (strain C58 / ATCC 33970)
Q5V341 1.07e-76 249 37 11 433 3 cbiA Cobyrinate a,c-diamide synthase Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
Q975N0 2.74e-76 248 33 12 445 3 cbiA Cobyrinate a,c-diamide synthase Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
A4VJ35 4.84e-74 242 35 9 441 3 cobB Hydrogenobyrinate a,c-diamide synthase Stutzerimonas stutzeri (strain A1501)
Q47T68 2.53e-73 241 36 8 455 3 cobB Hydrogenobyrinate a,c-diamide synthase Thermobifida fusca (strain YX)
A6X051 5.05e-72 237 36 9 441 3 cobB Hydrogenobyrinate a,c-diamide synthase Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37)
Q4JAI7 7.33e-72 236 32 11 443 3 cbiA Cobyrinate a,c-diamide synthase Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
Q9HPL7 1.54e-71 236 35 10 439 3 cbiA Cobyrinate a,c-diamide synthase Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
Q8YHU1 2.36e-71 235 37 8 436 3 cobB Hydrogenobyrinate a,c-diamide synthase Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q57CK2 2.36e-71 235 37 8 436 3 cobB Hydrogenobyrinate a,c-diamide synthase Brucella abortus biovar 1 (strain 9-941)
O68108 1.3e-70 233 36 9 404 3 cobB Hydrogenobyrinate a,c-diamide synthase Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
A5VR62 1.43e-70 233 36 8 436 3 cobB Hydrogenobyrinate a,c-diamide synthase Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Q8G020 2.01e-70 233 36 7 435 3 cobB Hydrogenobyrinate a,c-diamide synthase Brucella suis biovar 1 (strain 1330)
Q9I471 2.63e-70 232 33 9 447 3 cobB Hydrogenobyrinate a,c-diamide synthase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P21632 1.43e-65 220 33 5 400 1 cobB Hydrogenobyrinate a,c-diamide synthase Sinorhizobium sp.
Q92P48 3.24e-62 211 32 6 437 3 cobB Hydrogenobyrinate a,c-diamide synthase Rhizobium meliloti (strain 1021)
Q9KER6 1.17e-07 56 27 8 211 3 bioD ATP-dependent dethiobiotin synthetase BioD Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
A7MX33 2.3e-07 55 28 7 205 3 bioD ATP-dependent dethiobiotin synthetase BioD Vibrio campbellii (strain ATCC BAA-1116)
B5QYX6 3.08e-07 56 23 18 459 3 cobQ Cobyric acid synthase Salmonella enteritidis PT4 (strain P125109)
B5FLY7 3.08e-07 56 23 18 459 3 cobQ Cobyric acid synthase Salmonella dublin (strain CT_02021853)
B5RBK9 3.12e-07 56 23 18 459 3 cobQ Cobyric acid synthase Salmonella gallinarum (strain 287/91 / NCTC 13346)
Q8Z5N6 4.37e-07 55 23 18 459 3 cobQ Cobyric acid synthase Salmonella typhi
B5BG57 4.37e-07 55 23 18 459 3 cobQ Cobyric acid synthase Salmonella paratyphi A (strain AKU_12601)
Q5PDU3 4.37e-07 55 23 18 459 3 cobQ Cobyric acid synthase Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4T8X1 4.37e-07 55 23 18 459 3 cobQ Cobyric acid synthase Salmonella heidelberg (strain SL476)
B5EWY5 4.81e-07 55 23 18 459 3 cobQ Cobyric acid synthase Salmonella agona (strain SL483)
Q87QN3 5.03e-07 53 27 7 205 3 bioD ATP-dependent dethiobiotin synthetase BioD Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q05597 6.65e-07 55 22 18 462 3 cbiP Cobyric acid synthase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q57MX8 7.01e-07 55 23 18 459 3 cobQ Cobyric acid synthase Salmonella choleraesuis (strain SC-B67)
B4TZP8 7.52e-07 55 22 18 462 3 cobQ Cobyric acid synthase Salmonella schwarzengrund (strain CVM19633)
Q7MLU7 2.18e-06 52 27 7 207 3 bioD ATP-dependent dethiobiotin synthetase BioD Vibrio vulnificus (strain YJ016)
Q8D8N2 2.18e-06 52 27 7 207 3 bioD ATP-dependent dethiobiotin synthetase BioD Vibrio vulnificus (strain CMCP6)
Q57602 7.24e-05 48 27 9 206 4 MJ0138 Putative glutamine amidotransferase-like protein MJ0138 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
A9MLS5 0.001 45 32 3 97 3 cobQ Cobyric acid synthase Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13680
Feature type CDS
Gene -
Product cobyrinate a,c-diamide synthase
Location 372560 - 373945 (strand: 1)
Length 1386 (nucleotides) / 461 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3093
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain
PF07685 CobB/CobQ-like glutamine amidotransferase domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1797 Coenzyme transport and metabolism (H) H Cobyrinic acid a,c-diamide synthase

Kegg Ortholog Annotation(s)

Protein Sequence

MNKAQKQVFVIAGTSSGCGKTTITLGIMRALSARGLTVQPCKVGPDYLDSSWHTTVTGVPSRNLDAFMLPESILTSQFHHYMQDKDAGVIEGVMGLYDGFGTDPHYCSTAAMAKQLGCPVILLVDGKAVSTSIAATVMGFQHFDPTLNIAGVLINRVNSDNHYQLLKHAIEHYCDIPVLGYIPVMADIELPSRHLGLIPPQEQTQQTERWQRLAEQIEKTTDINTLLTLTQWQAPQTCTAPVLTTPDAGRGLTVAVAQDAAFNFYYPDNLDLIRHCGAEIITFSPLHDKKLPDACDMIYIGGGYPEVYAEQLSANKEMRDALLAAHQRGVPVYAECGGLMYLGDTLTDSNNQTYPMTGIISGHSTMGNRLKRFGYCEGTALTDTTLVKAGDRLRGHEFHYSDFMTDLPPAFEFIKERDGEVQKRWTGGYQVGNTFAGYLHVHFAQRPGLLDHWFSLARGVL

Flanking regions ( +/- flanking 50bp)

CCTGTTATCAGGACGTTTTTTTGGCAACAATATAGTGTCAAAGGTAGCGTATGAATAAGGCACAAAAACAGGTTTTTGTTATTGCCGGAACCAGTAGTGGTTGCGGTAAAACCACCATTACGCTGGGAATTATGCGGGCACTGAGTGCGCGCGGACTGACTGTTCAGCCCTGCAAAGTTGGTCCTGACTATCTCGACAGCAGTTGGCACACCACAGTGACCGGTGTCCCCTCCCGTAATCTGGACGCCTTTATGCTGCCGGAATCCATCCTGACTTCTCAGTTTCATCATTATATGCAGGATAAAGACGCCGGTGTTATTGAAGGCGTGATGGGACTTTATGATGGTTTTGGTACCGATCCGCACTATTGCAGTACTGCCGCGATGGCAAAACAACTCGGCTGCCCGGTCATCTTACTGGTCGACGGCAAAGCGGTTTCCACGTCGATTGCCGCCACTGTTATGGGTTTTCAGCATTTCGACCCGACACTGAATATTGCCGGTGTGCTGATTAACCGGGTCAACAGCGACAACCACTATCAACTTCTGAAACACGCAATTGAACATTATTGCGATATACCTGTTCTCGGCTATATTCCGGTTATGGCAGATATTGAACTGCCTTCCCGCCACCTGGGGCTTATTCCGCCACAGGAGCAGACACAACAGACAGAGCGCTGGCAGCGGCTGGCTGAACAGATTGAAAAAACAACTGATATCAACACGTTACTCACACTCACACAATGGCAGGCACCGCAGACCTGCACCGCACCGGTACTGACCACCCCGGACGCCGGACGCGGGCTGACCGTCGCAGTTGCACAGGATGCCGCGTTTAACTTCTATTATCCCGATAATCTGGATCTCATCCGCCATTGTGGCGCAGAAATCATCACTTTCAGCCCGCTGCATGACAAAAAACTGCCTGACGCATGCGATATGATTTATATCGGCGGGGGATATCCGGAAGTTTACGCAGAGCAACTGTCCGCCAATAAAGAGATGCGGGATGCGTTACTTGCCGCCCACCAGCGCGGTGTTCCTGTTTATGCGGAATGCGGCGGTCTGATGTATCTCGGTGATACCCTGACCGACAGCAACAACCAGACTTACCCGATGACCGGCATTATCAGCGGACACAGCACAATGGGTAACCGTCTCAAACGTTTCGGCTACTGTGAGGGAACCGCGCTGACGGACACCACACTGGTTAAAGCCGGTGATCGCCTGCGCGGGCATGAGTTCCATTATTCTGATTTCATGACTGATCTGCCTCCTGCGTTTGAATTTATCAAAGAGCGCGACGGCGAAGTACAAAAGCGCTGGACTGGCGGTTATCAGGTCGGAAATACCTTTGCCGGTTATTTGCATGTGCATTTTGCCCAGCGTCCCGGATTACTCGATCACTGGTTCTCTCTTGCGCGGGGCGTGTTATGACACTGCTCAGCTGGCTGCTTGCCTTTCTCCTCGACTGGCGCCTCGGTGAC