Homologs in group_3093

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_17110 EHELCC_17110 100.0 Morganella morganii S2 cobB cobyrinate a,c-diamide synthase
NLDBIP_18490 NLDBIP_18490 100.0 Morganella morganii S4 cobB cobyrinate a,c-diamide synthase
LHKJJB_09135 LHKJJB_09135 100.0 Morganella morganii S3 cobB cobyrinate a,c-diamide synthase
HKOGLL_08685 HKOGLL_08685 100.0 Morganella morganii S5 cobB cobyrinate a,c-diamide synthase
F4V73_RS13680 F4V73_RS13680 86.8 Morganella psychrotolerans - cobyrinate a,c-diamide synthase

Distribution of the homologs in the orthogroup group_3093

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3093

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P29946 0.0 585 62 4 461 1 cbiA Cobyrinate a,c-diamide synthase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q720N8 1.32e-167 482 52 5 455 3 cbiA Cobyrinate a,c-diamide synthase Listeria monocytogenes serotype 4b (strain F2365)
Q92CL7 2.12e-167 481 51 5 459 3 cbiA Cobyrinate a,c-diamide synthase Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
Q8Y7T0 2.31e-167 481 51 5 455 3 cbiA Cobyrinate a,c-diamide synthase Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
A3CL56 7.57e-148 432 48 4 447 3 cbiA Cobyrinate a,c-diamide synthase Streptococcus sanguinis (strain SK36)
B2G9J4 9.6e-129 383 45 6 449 3 cbiA Cobyrinate a,c-diamide synthase Limosilactobacillus reuteri subsp. reuteri (strain JCM 1112)
A5VM87 9.6e-129 383 45 6 449 3 cbiA Cobyrinate a,c-diamide synthase Limosilactobacillus reuteri (strain DSM 20016)
O87698 2.34e-112 342 39 4 447 3 cbiA Cobyrinate a,c-diamide synthase Priestia megaterium
Q3ZWJ9 1.22e-108 332 40 5 460 3 cbiA Cobyrinate a,c-diamide synthase Dehalococcoides mccartyi (strain CBDB1)
Q8RCP4 4.79e-107 328 41 6 437 3 cbiA Cobyrinate a,c-diamide synthase Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
Q3ZA71 4.9e-107 328 39 6 458 3 cbiA Cobyrinate a,c-diamide synthase Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195)
P73002 5.69e-106 326 40 4 439 3 cbiA Cobyrinate a,c-diamide synthase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9KBM8 1.36e-105 324 40 6 452 3 cbiA Cobyrinate a,c-diamide synthase Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q8TK00 2.42e-105 325 40 9 460 1 cbiA Cobyrinate a,c-diamide synthase Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
Q897K3 3.8e-104 320 41 9 439 3 cbiA Cobyrinate a,c-diamide synthase Clostridium tetani (strain Massachusetts / E88)
Q46FL0 1.21e-103 320 39 10 462 1 cbiA Cobyrinate a,c-diamide synthase Methanosarcina barkeri (strain Fusaro / DSM 804)
Q97JB1 3.24e-103 317 40 7 445 3 cbiA Cobyrinate a,c-diamide synthase Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q5MZU1 4.58e-102 315 40 5 448 3 cbiA Cobyrinate a,c-diamide synthase Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
A5UMJ2 1.7e-100 311 36 7 458 3 cbiA Cobyrinate a,c-diamide synthase Methanobrevibacter smithii (strain ATCC 35061 / DSM 861 / OCM 144 / PS)
A1AT17 2.68e-100 311 40 6 455 3 cbiA Cobyrinate a,c-diamide synthase Pelobacter propionicus (strain DSM 2379 / NBRC 103807 / OttBd1)
Q7NF32 3.98e-100 310 42 7 435 3 cbiA Cobyrinate a,c-diamide synthase Gloeobacter violaceus (strain ATCC 29082 / PCC 7421)
Q6L2V8 7.81e-100 309 39 8 445 3 cbiA Cobyrinate a,c-diamide synthase Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828 / KAW 2/3)
Q75FQ8 2.3e-99 308 37 6 446 3 cbiA Cobyrinate a,c-diamide synthase Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)
Q8EXQ4 5.62e-99 307 37 6 447 3 cbiA Cobyrinate a,c-diamide synthase Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
Q8R659 2.52e-98 305 37 9 459 3 cbiA Cobyrinate a,c-diamide synthase Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355)
O28054 3.55e-98 305 39 7 442 3 cbiA Cobyrinate a,c-diamide synthase Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q3A7A3 8.02e-98 304 42 6 447 3 cbiA Cobyrinate a,c-diamide synthase Syntrophotalea carbinolica (strain DSM 2380 / NBRC 103641 / GraBd1)
O27509 1.72e-97 303 38 8 443 3 cbiA Cobyrinate a,c-diamide synthase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
A6VH63 3.15e-97 302 37 9 448 3 cbiA Cobyrinate a,c-diamide synthase Methanococcus maripaludis (strain C7 / ATCC BAA-1331)
A4FW46 4.35e-97 302 37 9 445 3 cbiA Cobyrinate a,c-diamide synthase Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
Q58816 4.39e-97 302 38 11 444 3 cbiA Cobyrinate a,c-diamide synthase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q2NHQ3 5.61e-97 302 37 6 442 3 cbiA Cobyrinate a,c-diamide synthase Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3)
Q97BP4 6.45e-96 299 38 9 440 3 cbiA Cobyrinate a,c-diamide synthase Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
A6UQC1 1.13e-95 298 35 10 447 3 cbiA Cobyrinate a,c-diamide synthase Methanococcus vannielii (strain ATCC 35089 / DSM 1224 / JCM 13029 / OCM 148 / SB)
Q9RJ16 5.13e-93 293 38 12 487 3 cobB Hydrogenobyrinate a,c-diamide synthase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q9HIX6 1.73e-90 285 37 9 449 3 cbiA Cobyrinate a,c-diamide synthase Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
Q98KP1 9.68e-87 275 38 4 396 3 cobB Hydrogenobyrinate a,c-diamide synthase Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
Q980B1 3.68e-86 273 35 9 438 3 cbiA Cobyrinate a,c-diamide synthase Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
A4G3R1 6.17e-85 270 36 12 455 3 cbiA Cobyrinate a,c-diamide synthase Herminiimonas arsenicoxydans
Q8UBQ8 2.83e-84 268 37 4 396 3 cobB Hydrogenobyrinate a,c-diamide synthase Agrobacterium fabrum (strain C58 / ATCC 33970)
A0L8B9 3.43e-83 266 36 10 450 3 cbiA Cobyrinate a,c-diamide synthase Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1)
Q975N0 2.12e-78 253 33 12 445 3 cbiA Cobyrinate a,c-diamide synthase Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
Q5V341 4.49e-78 253 36 12 454 3 cbiA Cobyrinate a,c-diamide synthase Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
P9WP97 5.8e-78 253 35 11 456 1 cobB Hydrogenobyrinate a,c-diamide synthase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP96 5.8e-78 253 35 11 456 3 cobB Hydrogenobyrinate a,c-diamide synthase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P63836 5.8e-78 253 35 11 456 3 cobB Hydrogenobyrinate a,c-diamide synthase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q4JAI7 1.34e-74 243 33 12 445 3 cbiA Cobyrinate a,c-diamide synthase Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
Q47T68 2.31e-72 239 37 8 455 3 cobB Hydrogenobyrinate a,c-diamide synthase Thermobifida fusca (strain YX)
Q9HPL7 4.77e-72 237 38 11 415 3 cbiA Cobyrinate a,c-diamide synthase Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
O68108 3.19e-70 232 38 12 402 3 cobB Hydrogenobyrinate a,c-diamide synthase Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
A6X051 3.2e-70 232 35 7 439 3 cobB Hydrogenobyrinate a,c-diamide synthase Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37)
Q8YHU1 2.34e-69 230 36 6 434 3 cobB Hydrogenobyrinate a,c-diamide synthase Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q57CK2 2.34e-69 230 36 6 434 3 cobB Hydrogenobyrinate a,c-diamide synthase Brucella abortus biovar 1 (strain 9-941)
Q8G020 1.67e-68 228 36 7 435 3 cobB Hydrogenobyrinate a,c-diamide synthase Brucella suis biovar 1 (strain 1330)
A5VR62 3.29e-68 227 36 6 434 3 cobB Hydrogenobyrinate a,c-diamide synthase Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Q9I471 1.54e-66 223 33 10 450 3 cobB Hydrogenobyrinate a,c-diamide synthase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A4VJ35 8.12e-66 220 34 9 447 3 cobB Hydrogenobyrinate a,c-diamide synthase Stutzerimonas stutzeri (strain A1501)
P21632 3.81e-64 216 34 5 395 1 cobB Hydrogenobyrinate a,c-diamide synthase Sinorhizobium sp.
Q92P48 5.66e-62 210 34 9 438 3 cobB Hydrogenobyrinate a,c-diamide synthase Rhizobium meliloti (strain 1021)
B2G9H7 4.68e-11 68 23 16 488 3 cobQ Cobyric acid synthase Limosilactobacillus reuteri subsp. reuteri (strain JCM 1112)
A5VM70 4.68e-11 68 23 16 488 3 cobQ Cobyric acid synthase Limosilactobacillus reuteri (strain DSM 20016)
Q7MLU7 4.84e-07 54 26 8 213 3 bioD ATP-dependent dethiobiotin synthetase BioD Vibrio vulnificus (strain YJ016)
Q8D8N2 4.84e-07 54 26 8 213 3 bioD ATP-dependent dethiobiotin synthetase BioD Vibrio vulnificus (strain CMCP6)
Q87QN3 3.24e-05 48 24 8 211 3 bioD ATP-dependent dethiobiotin synthetase BioD Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
B5QYX6 0.000112 48 22 19 458 3 cobQ Cobyric acid synthase Salmonella enteritidis PT4 (strain P125109)
B5FLY7 0.000112 48 22 19 458 3 cobQ Cobyric acid synthase Salmonella dublin (strain CT_02021853)
B5RBK9 0.000125 48 22 19 458 3 cobQ Cobyric acid synthase Salmonella gallinarum (strain 287/91 / NCTC 13346)
Q8Z5N6 0.000149 47 22 19 458 3 cobQ Cobyric acid synthase Salmonella typhi
B5BG57 0.000149 47 22 19 458 3 cobQ Cobyric acid synthase Salmonella paratyphi A (strain AKU_12601)
Q5PDU3 0.000149 47 22 19 458 3 cobQ Cobyric acid synthase Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4T8X1 0.000149 47 22 19 458 3 cobQ Cobyric acid synthase Salmonella heidelberg (strain SL476)
B5EWY5 0.000153 47 22 19 458 3 cobQ Cobyric acid synthase Salmonella agona (strain SL483)
Q05597 0.000164 47 21 17 458 3 cbiP Cobyric acid synthase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TZP8 0.00017 47 21 17 458 3 cobQ Cobyric acid synthase Salmonella schwarzengrund (strain CVM19633)
Q57MX8 0.000259 47 22 19 458 3 cobQ Cobyric acid synthase Salmonella choleraesuis (strain SC-B67)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_18915
Feature type CDS
Gene cobB
Product cobyrinate a,c-diamide synthase
Location 25925 - 27310 (strand: -1)
Length 1386 (nucleotides) / 461 (amino acids)

Contig

Accession contig_36
Length 27638 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3093
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain
PF07685 CobB/CobQ-like glutamine amidotransferase domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1797 Coenzyme transport and metabolism (H) H Cobyrinic acid a,c-diamide synthase

Kegg Ortholog Annotation(s)

Protein Sequence

MNKAQKQVFVIAGTSSGCGKTTITLGIMRALSARGLRVQPCKVGPDYLDSSWHTAVTGVPSRNLDAFMLPESVLTPQFRHYMQDKDAGVIEGVMGLYDGFGTDPHYCSTAAMAKQLNCPVIMLVDGKAVSTSIAATVMGFQHFDPSLNIAGVLINRVNSDSHFQLLKHAIEHYCHVPVIGYVPVMSDIKLPSRHLGLIPPQEQAQQTERWQRLADQIEKTVDVDKLLSLTHWQAPADSTPIQLATPDAGRGLTVAVADDAAFNFYYPDNLDLLRQSGAEIVTFSPLNDSVLPDPCHMIYIGGGYPEVYAEKLSSNTVMRDALLAAHQRGIPVYAECGGLMYLGETLTDSTGNTFPMTGIIAGHSTMGNRLKRFGYCEGTALTDTTLVRAGECLRGHEFHYSDFETDLPPAFEFIKERDGEILKRWHGGYQVGNTFAGYLHVHFAQRPGLLDHWFALARSVL

Flanking regions ( +/- flanking 50bp)

CCTGGTATCAGGACGTTTTTTTGGCAACAACACCGTGTCAAAGGTAGCGTATGAATAAGGCACAAAAACAGGTCTTCGTAATCGCGGGCACCAGCAGCGGCTGCGGAAAAACCACCATCACCCTCGGGATCATGCGGGCACTCAGTGCACGCGGATTGCGTGTCCAGCCCTGCAAAGTCGGCCCTGATTACCTCGACAGCAGCTGGCATACCGCCGTCACCGGCGTACCTTCCCGTAACCTGGATGCCTTTATGCTGCCGGAGTCCGTTCTGACCCCGCAATTCCGTCATTATATGCAGGACAAAGACGCCGGTGTGATTGAGGGTGTGATGGGCCTGTATGACGGCTTCGGTACCGATCCTCACTATTGCAGCACCGCCGCGATGGCAAAACAGCTGAACTGCCCGGTGATTATGCTGGTCGACGGCAAAGCGGTTTCCACCTCAATTGCCGCCACGGTGATGGGATTTCAGCATTTTGATCCGTCACTGAATATCGCCGGGGTGCTGATTAACCGGGTTAACAGTGACAGCCATTTTCAGCTTCTGAAACACGCGATTGAACATTACTGCCATGTGCCGGTGATCGGCTACGTTCCGGTGATGAGTGATATTAAACTCCCTTCCCGTCATCTGGGGCTGATCCCGCCGCAGGAGCAGGCACAGCAGACTGAGCGCTGGCAGCGCCTGGCCGATCAGATAGAAAAAACCGTTGATGTGGATAAGCTGCTTTCCCTGACACACTGGCAGGCACCGGCAGACAGCACACCAATACAGCTCGCCACACCGGATGCCGGACGCGGGCTGACCGTTGCCGTGGCGGATGATGCCGCTTTTAACTTCTATTATCCTGATAATCTCGATTTACTGCGTCAGAGCGGCGCGGAGATTGTCACATTCAGCCCGCTCAATGACAGCGTCCTGCCGGATCCGTGCCATATGATTTACATCGGCGGCGGTTATCCGGAAGTCTATGCTGAAAAACTTTCATCTAACACCGTGATGCGGGACGCACTGCTGGCAGCGCATCAGCGCGGTATTCCTGTTTATGCGGAGTGCGGCGGGCTGATGTATCTCGGTGAAACCCTGACAGACAGCACCGGCAACACCTTCCCGATGACCGGCATCATTGCCGGACACAGCACCATGGGTAACCGACTGAAGCGCTTTGGTTACTGTGAAGGTACCGCACTGACAGACACCACGCTGGTTCGTGCCGGTGAATGCCTGCGCGGCCACGAGTTTCATTATTCTGATTTTGAGACTGATCTGCCGCCTGCTTTTGAGTTTATCAAAGAGCGCGACGGCGAAATCCTCAAACGCTGGCACGGCGGTTATCAGGTCGGAAACACCTTTGCCGGTTATCTGCATGTGCATTTTGCCCAGCGTCCGGGGTTATTGGATCACTGGTTTGCCCTGGCACGGAGTGTGTTATGACACTGCTCAGCTGGCTGGCCGCTTTCCTGCTCGACTGGCGCCTCGGTGAC