Homologs in group_30

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14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02780 FBDBKF_02780 17.6 Morganella morganii S1 lysR DNA-binding transcriptional regulator, LysR family
EHELCC_03250 EHELCC_03250 17.6 Morganella morganii S2 lysR DNA-binding transcriptional regulator, LysR family
NLDBIP_00210 NLDBIP_00210 17.6 Morganella morganii S4 lysR DNA-binding transcriptional regulator, LysR family
LHKJJB_01825 LHKJJB_01825 17.6 Morganella morganii S3 lysR DNA-binding transcriptional regulator, LysR family
HKOGLL_01865 HKOGLL_01865 17.6 Morganella morganii S5 lysR DNA-binding transcriptional regulator, LysR family
F4V73_RS01700 F4V73_RS01700 15.1 Morganella psychrotolerans - LysR family transcriptional regulator
F4V73_RS03270 F4V73_RS03270 21.0 Morganella psychrotolerans - LysR family transcriptional regulator
F4V73_RS04355 F4V73_RS04355 22.3 Morganella psychrotolerans - LysR family transcriptional regulator
F4V73_RS05245 F4V73_RS05245 20.1 Morganella psychrotolerans - LysR substrate-binding domain-containing protein
F4V73_RS05520 F4V73_RS05520 23.0 Morganella psychrotolerans - LysR family transcriptional regulator
F4V73_RS06440 F4V73_RS06440 31.3 Morganella psychrotolerans - LysR substrate-binding domain-containing protein
F4V73_RS10230 F4V73_RS10230 22.4 Morganella psychrotolerans - LysR family transcriptional regulator
F4V73_RS13185 F4V73_RS13185 22.1 Morganella psychrotolerans - LysR family transcriptional regulator
PMI_RS03935 PMI_RS03935 21.7 Proteus mirabilis HI4320 yafC DNA-binding transcriptional regulator YafC

Distribution of the homologs in the orthogroup group_30

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_30

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P11720 2.89e-45 158 35 3 290 1 trpI HTH-type transcriptional regulator TrpI Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0A9F6 2.28e-44 156 34 5 290 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 2.28e-44 156 34 5 290 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 2.28e-44 156 34 5 290 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
P34818 6.58e-44 154 32 3 290 3 trpI HTH-type transcriptional regulator TrpI Pseudomonas syringae pv. syringae
P45099 6.92e-37 136 33 4 254 3 gcvA Glycine cleavage system transcriptional activator homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P52660 5.99e-35 131 30 2 288 3 blaA HTH-type transcriptional regulator BlaA Proteus vulgaris
P24734 7.17e-33 125 31 3 285 1 ampR HTH-type transcriptional activator AmpR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P12529 6.29e-31 120 31 7 282 1 ampR HTH-type transcriptional activator AmpR Citrobacter freundii
P46068 5.56e-30 118 29 6 296 2 dsdC HTH-type transcriptional regulator DsdC Escherichia coli (strain K12)
P14145 1.05e-29 117 28 2 277 3 ampR HTH-type transcriptional activator AmpR Rhodobacter capsulatus
P42507 1.31e-29 117 27 5 289 3 hvrB AhcY transcriptional activator HvrB Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P55576 4.98e-29 115 29 4 281 3 NGR_a02420 Uncharacterized HTH-type transcriptional regulator y4mQ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P52683 1.47e-28 114 33 3 198 3 smeR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Serratia marcescens
P52658 1.66e-28 114 29 4 248 3 ampR HTH-type transcriptional activator AmpR Citrobacter koseri
P05051 1.81e-27 111 29 6 291 3 ampR HTH-type transcriptional activator AmpR Enterobacter cloacae
O69772 2.6e-26 108 32 6 249 3 ampR HTH-type transcriptional activator AmpR Providencia stuartii
Q57083 2.45e-25 105 28 6 289 1 perR HTH-type transcriptional regulator PerR Escherichia coli (strain K12)
P52676 4.25e-25 105 30 2 203 3 nmcR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Enterobacter cloacae
P45461 1.88e-23 100 31 6 235 3 ampR HTH-type transcriptional activator AmpR Yersinia enterocolitica
Q5N5I5 4.63e-17 83 39 3 129 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 4.63e-17 83 39 3 129 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
Q9JXW7 5.87e-17 82 26 6 250 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P30864 7.3e-17 82 25 5 250 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
P37641 1.17e-16 82 25 8 298 3 yhjC Uncharacterized HTH-type transcriptional regulator YhjC Escherichia coli (strain K12)
Q8X4M5 1.91e-16 81 40 2 120 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
P27111 2.57e-16 80 40 2 120 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
Q9JPU9 2.7e-16 80 26 6 250 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup C (strain 8013)
Q6B936 1.72e-15 78 36 4 147 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
Q55459 2.93e-15 78 37 1 126 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P51205 9.04e-15 76 36 4 146 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
Q1XDT2 9.22e-15 76 36 4 146 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
P52696 2.37e-14 75 34 1 126 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
Q85G62 6.57e-14 73 36 4 149 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
P0A9G1 9.38e-14 73 26 9 238 3 metR HTH-type transcriptional regulator MetR Shigella flexneri
P0A9F9 9.38e-14 73 26 9 238 1 metR HTH-type transcriptional regulator MetR Escherichia coli (strain K12)
P0A9G0 9.38e-14 73 26 9 238 3 metR HTH-type transcriptional regulator MetR Escherichia coli O157:H7
P25544 2.34e-13 72 35 4 124 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
P39592 5.51e-13 71 33 2 127 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
P48271 7.87e-13 71 34 4 146 3 rbcR Probable RuBisCO transcriptional regulator Cyanophora paradoxa
O34685 8.34e-13 70 35 1 121 1 yofA HTH-type transcriptional regulator YofA Bacillus subtilis (strain 168)
O35038 2.2e-12 69 33 7 151 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
P75836 4.09e-12 68 24 5 254 3 ycaN Uncharacterized HTH-type transcriptional regulator YcaN Escherichia coli (strain K12)
P52689 6.94e-12 68 28 1 149 3 ltrA Probable HTH-type transcriptional regulator LtrA Klebsiella pneumoniae
O78432 7.76e-12 68 35 3 123 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
O19892 8.88e-12 68 33 4 147 3 rbcR Probable RuBisCO transcriptional regulator Cyanidium caldarium
Q1R6S1 9.21e-12 68 23 5 253 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain UTI89 / UPEC)
Q8FDH0 9.21e-12 68 23 5 253 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TD46 9.93e-12 67 23 5 253 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P45463 1.04e-11 67 23 5 253 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain K12)
P0A2Q4 1.15e-11 67 25 8 239 3 metR HTH-type transcriptional regulator MetR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q5 1.15e-11 67 25 8 239 3 metR HTH-type transcriptional regulator MetR Salmonella typhi
P94387 1.65e-11 67 32 4 143 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
P73123 1.95e-11 67 34 4 147 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q8KA72 2.38e-11 66 23 9 241 3 metR HTH-type transcriptional regulator MetR Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P76250 4.01e-11 66 24 3 255 1 dmlR HTH-type transcriptional regulator DmlR Escherichia coli (strain K12)
P52669 5.57e-11 65 33 1 123 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
Q8XBK9 5.97e-11 65 23 5 253 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O157:H7
Q3MCB5 1.01e-10 65 33 4 150 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
A0T0V5 1.15e-10 64 33 5 130 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
O06703 1.3e-10 64 29 10 261 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
P77309 1.33e-10 64 33 3 125 3 yneJ Uncharacterized HTH-type transcriptional regulator YneJ Escherichia coli (strain K12)
Q8YQ82 1.35e-10 64 33 4 150 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P0ACQ9 1.57e-10 64 30 3 158 3 tdcA HTH-type transcriptional regulator TdcA Shigella flexneri
P0ACQ7 1.57e-10 64 30 3 158 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli (strain K12)
P0ACQ8 1.57e-10 64 30 3 158 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli O157:H7
P96194 1.8e-10 61 43 0 86 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii
Q765S2 1.92e-10 63 33 2 125 3 allS HTH-type transcriptional activator AllS Klebsiella pneumoniae
P0ACR2 2.7e-10 63 46 0 80 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli (strain K12)
P0ACR3 2.7e-10 63 46 0 80 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli O157:H7
Q4G384 3.99e-10 63 31 4 146 3 rbcR Probable RuBisCO transcriptional regulator Emiliania huxleyi
A7Z5E4 5.47e-10 62 34 2 122 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
P67662 6.78e-10 62 25 1 141 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli (strain K12)
P67663 6.78e-10 62 25 1 141 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P67664 6.78e-10 62 25 1 141 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O157:H7
A0A0H2ZDG9 6.84e-10 62 25 7 260 3 PA14_22550 HTH-type transcriptional repressor PA14_22550 Pseudomonas aeruginosa (strain UCBPP-PA14)
P0A4T7 8.19e-10 62 29 1 126 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 8.19e-10 62 29 1 126 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
O68014 8.23e-10 62 33 3 132 1 benM HTH-type transcriptional regulator BenM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Q06610 8.97e-10 62 33 1 121 3 rbcR RuBisCO operon transcriptional regulator Acidithiobacillus ferrooxidans
P44821 1.24e-09 61 32 2 130 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q05840 1.56e-09 61 49 0 61 3 clcR HTH-type transcriptional regulator ClcR Pseudomonas putida
Q46M54 1.74e-09 61 50 0 61 1 tfdS HTH-type transcriptional regulator TfdS Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
Q46M57 1.82e-09 61 50 0 61 1 tfdR HTH-type transcriptional regulator TdfR Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
O33945 1.93e-09 61 41 0 75 3 None Probable cat1 operon transcriptional activator Acinetobacter lwoffii
P77744 2.59e-09 60 30 1 123 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
P0A2Q2 4.1e-09 60 34 1 128 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q3 4.1e-09 60 34 1 128 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhi
P45349 4.88e-09 60 26 2 123 3 metR HTH-type transcriptional regulator MetR Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P25545 5.07e-09 60 32 2 137 3 cbbR HTH-type transcriptional regulator CbbR Xanthobacter flavus
Q9X5P2 5.29e-09 59 32 1 124 2 oxyR Probable hydrogen peroxide-inducible genes activator Streptomyces viridosporus
P05827 5.44e-09 59 34 1 128 3 ilvY HTH-type transcriptional regulator IlvY Escherichia coli (strain K12)
Q04778 5.81e-09 59 29 1 122 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
O32186 7.58e-09 59 29 1 121 3 yusT Uncharacterized HTH-type transcriptional regulator YusT Bacillus subtilis (strain 168)
A1JI47 8.29e-09 58 33 0 109 3 hdfR HTH-type transcriptional regulator HdfR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q8FK66 8.31e-09 59 36 3 125 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TKD7 8.31e-09 59 36 3 125 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P42427 8.49e-09 58 35 0 81 3 tfdT HTH-type transcriptional regulator TfdT Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
Q47141 9.18e-09 58 32 1 123 1 hcaR Hca operon transcriptional activator HcaR Escherichia coli (strain K12)
A2CI69 9.26e-09 58 31 4 151 3 rbcR Probable RuBisCO transcriptional regulator Chlorokybus atmophyticus
Q1RF30 9.63e-09 58 34 2 125 3 allS HTH-type transcriptional activator AllS Escherichia coli (strain UTI89 / UPEC)
A1A8H0 9.63e-09 58 34 2 125 3 allS HTH-type transcriptional activator AllS Escherichia coli O1:K1 / APEC
P42722 1.01e-08 58 30 1 121 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P0ACR0 1.31e-08 58 41 1 92 1 allS HTH-type transcriptional activator AllS Escherichia coli (strain K12)
P0ACR1 1.31e-08 58 41 1 92 3 allS HTH-type transcriptional activator AllS Escherichia coli O157:H7
P20668 1.59e-08 58 33 1 118 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
P37499 3.85e-08 57 31 1 119 3 yybE Uncharacterized HTH-type transcriptional regulator YybE Bacillus subtilis (strain 168)
B1JQ39 4.21e-08 57 32 0 109 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 4.21e-08 57 32 0 109 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 4.21e-08 57 32 0 109 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 4.21e-08 57 32 0 109 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 4.21e-08 57 32 0 109 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 4.21e-08 57 32 0 109 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 4.21e-08 57 32 0 109 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 4.21e-08 57 32 0 109 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 4.21e-08 57 32 0 109 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
P49518 5.65e-08 56 30 5 130 3 rbcR Probable RuBisCO transcriptional regulator Trieres chinensis
P52691 5.69e-08 56 28 5 203 3 lrrA Probable HTH-type transcriptional regulator LrrA Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
A0T0G2 5.81e-08 56 28 3 123 3 rbcR Probable RuBisCO transcriptional regulator Phaeodactylum tricornutum (strain CCAP 1055/1)
P94403 6.16e-08 56 25 2 122 3 bsdA HTH-type transcriptional regulator BsdA Bacillus subtilis (strain 168)
O34827 6.38e-08 56 22 7 237 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
P94501 6.86e-08 56 30 1 121 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
P70785 8.35e-08 56 32 1 122 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P52595 9.06e-08 56 31 1 124 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
P77333 9.53e-08 55 22 9 296 1 pgrR HTH-type transcriptional regulator PgrR Escherichia coli (strain K12)
P52665 1.03e-07 53 37 0 79 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
P77559 1.16e-07 55 34 4 127 3 ynfL Uncharacterized HTH-type transcriptional regulator YnfL Escherichia coli (strain K12)
B2TU26 1.2e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q9HWH8 1.32e-07 55 25 7 255 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q3YVK2 1.43e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Shigella sonnei (strain Ss046)
P0A8S0 1.43e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri
Q0SYV7 1.43e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri serotype 5b (strain 8401)
Q31UM0 1.43e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 4 (strain Sb227)
B1LLU0 1.43e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SMS-3-5 / SECEC)
P0A8R9 1.43e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12)
B1IWY2 1.43e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6M0 1.43e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O9:H4 (strain HS)
B1X9Y2 1.43e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / DH10B)
C4ZZ35 1.43e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / MC4100 / BW2952)
B7UMM1 1.43e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q9S4Y7 1.45e-07 55 50 0 61 3 allS HTH-type transcriptional activator AllS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PCH2 1.45e-07 55 50 0 61 3 allS HTH-type transcriptional activator AllS Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q329U3 1.46e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Shigella dysenteriae serotype 1 (strain Sd197)
B6I4A0 1.46e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SE11)
B7M5B2 1.46e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O8 (strain IAI1)
B5YY14 1.46e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAW1 1.46e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7
B7L8A6 1.46e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain 55989 / EAEC)
A7ZTW7 1.46e-07 55 33 0 114 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O139:H28 (strain E24377A / ETEC)
Q57S50 1.54e-07 55 50 0 61 3 allS HTH-type transcriptional activator AllS Salmonella choleraesuis (strain SC-B67)
P55181 1.97e-07 55 29 5 147 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
Q01610 2.41e-07 54 30 2 158 3 PA2220 Putative transcriptional regulator Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P07774 2.63e-07 54 41 0 75 1 catM HTH-type transcriptional regulator CatM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P52666 2.63e-07 54 29 1 129 3 budR HTH-type transcriptional regulator BudR Raoultella terrigena
Q44311 3.14e-07 54 29 2 124 3 soxR HTH-type transcriptional regulator SoxR Arthrobacter sp. (strain TE1826)
B7LUJ5 3.2e-07 54 33 0 108 3 hdfR HTH-type transcriptional regulator HdfR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
P71318 3.29e-07 54 29 4 127 3 oxyR Hydrogen peroxide-inducible genes activator Pectobacterium carotovorum subsp. carotovorum
Q1R4H3 3.29e-07 54 33 0 108 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain UTI89 / UPEC)
P59369 3.29e-07 54 33 0 108 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAV4 3.29e-07 54 33 0 108 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N260 3.29e-07 54 33 0 108 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O81 (strain ED1a)
B7MGH6 3.29e-07 54 33 0 108 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O45:K1 (strain S88 / ExPEC)
B7NF72 3.51e-07 54 34 0 94 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Q8Z8R3 3.7e-07 54 50 0 61 3 allS HTH-type transcriptional activator AllS Salmonella typhi
P0ACQ4 3.76e-07 54 29 4 124 1 oxyR DNA-binding transcriptional dual regulator OxyR Escherichia coli (strain K12)
P0ACQ5 3.76e-07 54 29 4 124 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACQ6 3.76e-07 54 29 4 124 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O157:H7
B7NU32 3.89e-07 53 34 0 94 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
O87883 4.88e-07 52 30 1 125 3 oxyR Probable hydrogen peroxide-inducible genes activator (Fragment) Mycobacterium xenopi
Q9X725 5.32e-07 53 29 4 127 3 oxyR Hydrogen peroxide-inducible genes activator Dickeya chrysanthemi
Q57748 5.5e-07 53 28 1 120 3 MJ0300 Uncharacterized HTH-type transcriptional regulator MJ0300 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P52693 5.77e-07 53 30 4 134 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
B4SYF7 7.31e-07 53 32 0 108 3 hdfR HTH-type transcriptional regulator HdfR Salmonella newport (strain SL254)
P52044 7.31e-07 53 29 4 131 3 ygfI Uncharacterized HTH-type transcriptional regulator YgfI Escherichia coli (strain K12)
B4TNR5 7.94e-07 53 32 0 108 3 hdfR HTH-type transcriptional regulator HdfR Salmonella schwarzengrund (strain CVM19633)
B5FN59 8.16e-07 53 32 0 108 3 hdfR HTH-type transcriptional regulator HdfR Salmonella dublin (strain CT_02021853)
P0A2Q0 8.31e-07 53 32 0 108 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q1 8.31e-07 53 32 0 108 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhi
B5BIR0 8.31e-07 53 32 0 108 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain AKU_12601)
C0Q2U0 8.31e-07 53 32 0 108 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi C (strain RKS4594)
A9MXD5 8.31e-07 53 32 0 108 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJZ0 8.31e-07 53 32 0 108 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TAZ8 8.31e-07 53 32 0 108 3 hdfR HTH-type transcriptional regulator HdfR Salmonella heidelberg (strain SL476)
B5EZ22 8.31e-07 53 32 0 108 3 hdfR HTH-type transcriptional regulator HdfR Salmonella agona (strain SL483)
P77700 1.75e-06 52 37 0 78 1 yahB Uncharacterized HTH-type transcriptional regulator YahB Escherichia coli (strain K12)
P76369 1.84e-06 52 27 3 135 3 yeeY Uncharacterized HTH-type transcriptional regulator YeeY Escherichia coli (strain K12)
P45105 1.97e-06 52 27 5 108 3 cysB HTH-type transcriptional regulator CysB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P03030 3.12e-06 51 27 2 124 3 lysR Transcriptional activator protein LysR Escherichia coli (strain K12)
Q47005 4.01e-06 51 30 2 127 3 nac Nitrogen assimilation regulatory protein nac Escherichia coli (strain K12)
P0DUU5 4.26e-06 50 29 3 128 1 aceR HTH-type transcriptional regulator AceR Acinetobacter baumannii (strain ATCC 17978 / DSM 105126 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
A5F9F9 4.6e-06 50 26 1 124 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P0C6D1 4.68e-06 50 26 1 124 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P0ACR8 4.7e-06 50 29 1 118 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Shigella flexneri
P0ACR7 4.7e-06 50 29 1 118 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Escherichia coli (strain K12)
O32255 5.64e-06 50 29 6 136 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
P71025 8.91e-06 50 26 3 125 3 czcR HTH-type transcriptional regulator CzcR Bacillus subtilis (strain 168)
P96725 1.08e-05 49 20 4 254 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
Q00678 1.14e-05 49 27 2 122 3 nocR Regulatory protein NocR Agrobacterium fabrum (strain C58 / ATCC 33970)
P52685 1.52e-05 49 27 3 141 3 mauR Mau operon transcriptional activator Paracoccus denitrificans
P72131 1.73e-05 49 25 9 280 1 ptxR HTH-type transcriptional regulator PtxR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P43011 2.16e-05 48 24 2 142 3 HI_1364 Uncharacterized HTH-type transcriptional regulator HI_1364 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P27102 2.32e-05 48 31 1 119 3 tcbR HTH-type transcriptional regulator TcbR Pseudomonas sp. (strain P51)
P35112 4.86e-05 47 27 2 122 3 nocR Regulatory protein NocR Agrobacterium tumefaciens (strain T37)
P0A9F3 5.14e-05 47 24 4 105 3 cysB HTH-type transcriptional regulator CysB Escherichia coli (strain K12)
P0A9F4 5.14e-05 47 24 4 105 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F5 5.14e-05 47 24 4 105 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O157:H7
Q08597 6.2e-05 47 29 2 128 3 nac Nitrogen assimilation regulatory protein nac Klebsiella aerogenes
P77171 7.02e-05 47 26 4 146 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
P67668 7.2e-05 47 42 0 63 3 BQ2027_MB2303C Uncharacterized HTH-type transcriptional regulator Mb2303c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WMF3 7.2e-05 47 42 0 63 1 Rv2282c Uncharacterized HTH-type transcriptional regulator Rv2282c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMF2 7.2e-05 47 42 0 63 3 MT2340 Uncharacterized HTH-type transcriptional regulator MT2340 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P45600 8.3e-05 47 24 4 105 1 cysB HTH-type transcriptional regulator CysB Klebsiella pneumoniae
P37459 0.000122 46 26 3 130 3 sinR Probable HTH-type transcriptional regulator SinR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P06614 0.000124 46 24 4 105 1 cysB HTH-type transcriptional regulator CysB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P20667 0.000129 46 37 1 70 3 catR HTH-type transcriptional regulator CatR Pseudomonas putida
P39647 0.000153 46 26 1 123 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
P52678 0.000155 46 30 4 145 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium leprae (strain TN)
P44418 0.000158 46 25 3 128 3 oxyR Hydrogen peroxide-inducible genes activator Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P52659 0.000206 45 30 1 110 3 abaB HTH-type transcriptional regulator AbaB Streptomyces antibioticus
P67660 0.000229 45 36 1 77 1 yhaJ Probable HTH-type transcriptional regulator YhaJ Escherichia coli (strain K12)
P67661 0.000229 45 36 1 77 1 yhaJ HTH-type transcriptional regulator YhaJ Escherichia coli O157:H7
O33812 0.000241 45 27 1 113 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
P52677 0.0004 45 41 0 65 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium avium
P16931 0.000412 45 25 0 120 3 dgdR HTH-type transcriptional regulator DgdR Burkholderia cepacia
Q47083 0.000636 44 25 6 161 1 cbl HTH-type transcriptional regulator cbl Escherichia coli (strain K12)
P0A9G3 0.000661 44 25 0 88 3 nhaR Transcriptional activator protein NhaR Shigella flexneri
P0A9G2 0.000661 44 25 0 88 1 nhaR Transcriptional activator protein NhaR Escherichia coli (strain K12)
A4QH19 0.000891 43 27 2 118 1 shiR HTH-type transcriptional regulator ShiR Corynebacterium glutamicum (strain R)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS13375
Feature type CDS
Gene -
Product LysR family transcriptional regulator
Location 305701 - 306606 (strand: -1)
Length 906 (nucleotides) / 301 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_30
Orthogroup size 15
N. genomes 7

Actions

Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator Biofilm formation - Escherichia coli -

Protein Sequence

MKLPPLSSLRFFDAAARTGSFMKAAQELHVTHGAVSRQIRLLEEDLGVFLFERRNRAVFLTPAGQTLFQTTGQIFSQLAQTVEKIQHQQQDNVVSISCEPTIAMRWLIPRLSDFYQRYPAITVHLITAGGAIDFAKTGVSIALRRNDFKWHHDIHSVELCPEWIGRVQRPMVSQDTTGSVLLLPATRQDVWQTWQQLSGDSTDWQRTVSYEHFYMCIQAALAGQGVTAASFLMVADELLSGQLEASAGFMTDNTAYYLLFPSVPEKESPAWVFSLWLREKINESLTALHIRSLPPESDTIG

Flanking regions ( +/- flanking 50bp)

AGAAAAAAACGATATATCCTGACAGAAACAGGTTAGCTTTTGTGACAGATATGAAACTTCCGCCATTATCATCATTACGCTTTTTTGATGCCGCCGCGCGAACCGGCAGCTTTATGAAAGCCGCGCAGGAACTGCATGTCACTCATGGTGCCGTGAGCAGACAAATCCGCCTGCTGGAAGAGGATTTAGGTGTTTTTCTGTTTGAACGGCGCAACCGGGCTGTATTTCTGACCCCGGCGGGTCAGACATTGTTTCAGACCACCGGGCAGATCTTCAGCCAGCTTGCGCAGACAGTGGAAAAAATACAGCATCAGCAGCAGGACAATGTGGTCAGTATTTCCTGTGAACCGACGATTGCGATGCGCTGGCTTATTCCTCGTCTCAGTGATTTTTATCAGCGTTATCCTGCCATTACTGTGCATCTTATTACTGCCGGCGGGGCTATCGACTTTGCGAAAACCGGTGTCAGTATCGCGTTGCGCCGTAACGATTTTAAATGGCATCATGATATTCATTCAGTGGAATTATGCCCCGAATGGATTGGCAGGGTGCAGCGCCCGATGGTATCGCAGGATACTACCGGTTCCGTCCTGCTGCTTCCGGCGACGCGTCAGGATGTCTGGCAGACGTGGCAGCAATTATCCGGTGATTCAACGGATTGGCAACGCACTGTTTCCTATGAGCATTTTTATATGTGCATTCAGGCGGCGCTTGCCGGGCAGGGTGTCACCGCCGCTTCTTTTCTGATGGTGGCGGATGAATTGCTCTCAGGACAGTTAGAGGCATCTGCCGGATTTATGACAGACAATACCGCGTATTATCTGCTTTTCCCGTCAGTGCCGGAAAAAGAGAGTCCTGCATGGGTTTTCTCTCTCTGGCTGCGTGAAAAAATTAATGAAAGCCTGACAGCATTGCATATCCGCAGTCTCCCGCCGGAGAGTGATACTATCGGGTAAGATATCTGTTTTTCGTCGTATTACCGGAGAAAACCATGACACCACATCTT