Homologs in group_1311

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08030 FBDBKF_08030 85.2 Morganella morganii S1 hrpB ATP-dependent helicase HrpB
EHELCC_13860 EHELCC_13860 85.2 Morganella morganii S2 hrpB ATP-dependent helicase HrpB
NLDBIP_14305 NLDBIP_14305 85.2 Morganella morganii S4 hrpB ATP-dependent helicase HrpB
LHKJJB_08545 LHKJJB_08545 85.2 Morganella morganii S3 hrpB ATP-dependent helicase HrpB
HKOGLL_08095 HKOGLL_08095 85.2 Morganella morganii S5 hrpB ATP-dependent helicase HrpB
PMI_RS00975 PMI_RS00975 53.0 Proteus mirabilis HI4320 hrpB ATP-dependent helicase HrpB

Distribution of the homologs in the orthogroup group_1311

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1311

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37024 0.0 804 53 4 815 1 hrpB ATP-dependent RNA helicase HrpB Escherichia coli (strain K12)
O51767 8e-75 263 33 5 438 1 hrpA ATP-dependent RNA helicase HrpA Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
F4JMJ3 7.75e-74 261 38 6 405 2 At4g16680 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 Arabidopsis thaliana
Q10752 1.18e-72 261 36 6 425 3 cdc28 Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
F4IJV4 4.61e-69 250 36 6 424 2 MEE29 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 Arabidopsis thaliana
O45244 6.82e-69 249 36 6 426 1 mog-4 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 Caenorhabditis elegans
Q8VY00 2.09e-68 248 35 6 424 1 ESP3 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 Arabidopsis thaliana
Q54MH3 1.86e-66 243 35 9 432 3 dhx16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 Dictyostelium discoideum
O42643 1.29e-64 238 36 8 436 1 prp22 Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P53131 1.97e-64 233 35 7 416 1 PRP43 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q54F05 2.15e-64 238 35 8 435 3 dhx8 ATP-dependent RNA helicase dhx8 Dictyostelium discoideum
Q7YR39 8.08e-64 235 35 7 428 3 DHX16 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 Pan troglodytes
O60231 8.15e-64 235 35 7 428 1 DHX16 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 Homo sapiens
Q767K6 8.77e-64 235 35 7 428 3 DHX16 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 Sus scrofa
P36009 1.96e-63 230 33 6 434 1 DHR2 Probable ATP-dependent RNA helicase DHR2 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q17R09 4.63e-63 234 35 7 418 2 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 Bos taurus
P45018 4.64e-63 234 34 5 418 3 hrpA ATP-dependent RNA helicase HrpA homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q92620 1.11e-62 233 35 7 418 1 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 Homo sapiens
Q38953 1.52e-62 232 36 10 436 1 At3g26560 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 Arabidopsis thaliana
P20095 6.78e-62 228 33 8 437 1 PRP2 Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O42945 8.36e-62 225 34 9 431 3 prp43 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q03319 9.3e-62 225 33 5 417 3 prh1 Probable ATP-dependent RNA helicase prh1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q09530 1.66e-61 229 35 8 435 1 mog-5 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 Caenorhabditis elegans
O22899 1.79e-61 224 34 10 426 2 At2g47250 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 Arabidopsis thaliana
P24384 9.32e-61 226 35 8 419 1 PRP22 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q7K3M5 1.45e-60 221 34 10 421 2 Dhx15 ATP-dependent RNA helicase DHX15 homolog Drosophila melanogaster
O43143 6.77e-60 221 34 9 429 1 DHX15 ATP-dependent RNA helicase DHX15 Homo sapiens
P43329 7.81e-60 224 32 5 433 1 hrpA ATP-dependent RNA helicase HrpA Escherichia coli (strain K12)
Q5RAZ4 7.83e-60 221 34 9 429 2 DHX15 ATP-dependent RNA helicase DHX15 Pongo abelii
Q9P774 8.08e-60 224 35 8 419 3 prp16 Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
O35286 9.69e-60 220 34 9 429 1 Dhx15 ATP-dependent RNA helicase DHX15 Mus musculus
Q54NJ4 1.49e-59 219 34 10 413 3 dhx15 Putative ATP-dependent RNA helicase DHX15 Dictyostelium discoideum
Q93Y16 3.78e-59 217 33 4 430 1 At1g27900 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 Arabidopsis thaliana
Q9LZQ9 5.64e-59 217 33 9 433 2 At3g62310 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 Arabidopsis thaliana
Q14562 7.34e-59 221 33 8 435 1 DHX8 ATP-dependent RNA helicase DHX8 Homo sapiens
A2A4P0 8.78e-59 221 33 8 435 2 Dhx8 ATP-dependent RNA helicase DHX8 Mus musculus
Q9BKQ8 4.32e-58 214 34 10 423 3 ddx-35 Probable ATP-dependent RNA helicase DHX35 homolog Caenorhabditis elegans
Q9VL25 4.98e-58 214 33 9 439 1 ath ATP-dependent RNA helicase DHX33 Drosophila melanogaster
Q20875 5.34e-58 214 32 11 446 3 ddx-15 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 Caenorhabditis elegans
P34498 5.8e-58 218 33 8 419 1 mog-1 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 Caenorhabditis elegans
Q14147 9.78e-58 218 34 5 405 1 DHX34 Probable ATP-dependent RNA helicase DHX34 Homo sapiens
Q9DBV3 1.09e-56 214 34 5 405 1 Dhx34 Probable ATP-dependent RNA helicase DHX34 Mus musculus
A1Z9L3 3.3e-56 213 33 8 434 1 pea ATP-dependent RNA helicase DHX8 Drosophila melanogaster
F4K2E9 3.48e-56 213 32 8 437 1 CUV Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 Arabidopsis thaliana
Q9H5Z1 1.56e-55 207 32 8 417 1 DHX35 Probable ATP-dependent RNA helicase DHX35 Homo sapiens
Q80VY9 4.47e-55 205 32 8 458 1 Dhx33 ATP-dependent RNA helicase DHX33 Mus musculus
Q6PE54 5.91e-55 206 32 7 426 1 Dhx40 Probable ATP-dependent RNA helicase DHX40 Mus musculus
Q7L2E3 2.32e-54 207 35 10 442 1 DHX30 ATP-dependent RNA helicase DHX30 Homo sapiens
Q5XI69 2.36e-54 204 32 7 426 2 Dhx40 Probable ATP-dependent RNA helicase DHX40 Rattus norvegicus
Q9H6R0 2.42e-54 203 32 8 441 1 DHX33 ATP-dependent RNA helicase DHX33 Homo sapiens
Q8IX18 4.27e-54 204 32 7 423 1 DHX40 Probable ATP-dependent RNA helicase DHX40 Homo sapiens
Q5ZI74 5.44e-54 206 32 9 446 2 DHX30 ATP-dependent RNA helicase DHX30 Gallus gallus
Q5RBD4 5.65e-54 202 31 8 417 2 DHX35 Probable ATP-dependent RNA helicase DHX35 Pongo abelii
Q5R607 6.37e-54 206 35 10 442 2 DHX30 ATP-dependent RNA helicase DHX30 Pongo abelii
Q5R864 1.15e-53 202 32 7 423 2 DHX40 Probable ATP-dependent RNA helicase DHX40 Pongo abelii
F4IE66 3.21e-53 200 31 8 450 1 RID1 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 Arabidopsis thaliana
Q9HE06 3.57e-53 199 32 9 413 3 SPAC20H4.09 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q99PU8 7.61e-53 203 34 10 443 1 Dhx30 ATP-dependent RNA helicase DHX30 Mus musculus
Q5BJS0 7.72e-53 203 34 10 443 1 Dhx30 ATP-dependent RNA helicase DHX30 Rattus norvegicus
Q2NKY8 1.36e-52 202 35 10 442 2 DHX30 ATP-dependent RNA helicase DHX30 Bos taurus
F4ILR7 1.48e-52 201 30 7 478 2 At2g35920 DExH-box ATP-dependent RNA helicase DExH1 Arabidopsis thaliana
O94536 1.82e-52 202 31 7 442 3 ucp12 Putative ATP-dependent RNA helicase ucp12 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
F4JRJ6 4.5e-52 197 32 11 417 3 At4g18465 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 Arabidopsis thaliana
Q06698 1.65e-51 199 30 11 463 1 YLR419W Putative ATP-dependent RNA helicase YLR419W Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
F4KGU4 1.22e-50 196 32 9 423 3 At5g10370 ATP-dependent RNA helicase DEAH12, chloroplastic Arabidopsis thaliana
P15938 1.91e-49 192 33 10 446 1 PRP16 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
F4IM84 3.31e-48 188 31 12 489 3 At2g01130 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial Arabidopsis thaliana
P0CE10 6.91e-48 188 32 9 423 3 At4g01020 ATP-dependent RNA helicase DEAH11, chloroplastic Arabidopsis thaliana
O17438 7.81e-48 179 34 6 346 2 PRP1 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 (Fragment) Strongylocentrotus purpuratus
Q9HDY4 5.19e-43 172 28 13 477 3 SPAPB1A10.06c Putative ATP-dependent RNA helicase PB1A10.06c Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q5UQ96 3.59e-42 167 29 14 467 1 MIMI_L540 Putative ATP-dependent RNA helicase L540 Acanthamoeba polyphaga mimivirus
Q581T1 1.69e-41 168 28 9 454 1 REH2 RNA editing associated helicase 2 Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Q296Q5 2.54e-39 161 27 16 502 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila pseudoobscura pseudoobscura
P0C7L7 3.11e-39 161 31 13 449 3 UMAG_11114 Putative DEAH-box ATP-dependent helicase UM11114 Ustilago maydis (strain 521 / FGSC 9021)
B8A4F4 3.49e-38 157 29 7 408 2 tdrd9 ATP-dependent RNA helicase TDRD9 Danio rerio
Q3MHU3 6.57e-38 157 29 7 388 2 Tdrd9 ATP-dependent RNA helicase TDRD9 Rattus norvegicus
Q14BI7 1.08e-37 156 29 7 387 1 Tdrd9 ATP-dependent RNA helicase TDRD9 Mus musculus
Q8NDG6 2.22e-37 155 29 8 388 1 TDRD9 ATP-dependent RNA helicase TDRD9 Homo sapiens
B4GEU5 6.49e-37 154 26 15 487 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila persimilis
B4HLH4 7.14e-37 153 27 14 507 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila sechellia
Q7QCW2 1.07e-36 153 30 9 394 3 spn-E Probable ATP-dependent RNA helicase spindle-E Anopheles gambiae
B4PRJ9 2.75e-36 152 27 14 488 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila yakuba
B3P3W1 1.14e-35 149 30 10 378 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila erecta
A3KMI0 1.07e-34 146 29 15 490 2 dhx29 ATP-dependent RNA helicase dhx29 Xenopus laevis
Q9VF26 2.11e-34 145 28 8 376 2 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila melanogaster
B4LX81 4.79e-34 144 28 18 488 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila virilis
Q16JS8 1.04e-33 143 27 13 486 3 spn-E Probable ATP-dependent RNA helicase spindle-E Aedes aegypti
B4K5R2 1.88e-33 142 32 12 362 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila mojavensis
B3M383 3.28e-33 142 30 9 354 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila ananassae
B4NBB0 5.21e-33 141 27 16 492 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila willistoni
B4JT42 1.79e-32 139 26 14 485 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila grimshawi
B0XDC4 2.94e-32 139 24 12 522 3 spn-E Probable ATP-dependent RNA helicase spindle-E Culex quinquefasciatus
Q28141 9.24e-31 134 36 2 219 1 DHX9 ATP-dependent RNA helicase A Bos taurus
Q28141 3.07e-22 107 32 4 189 1 DHX9 ATP-dependent RNA helicase A Bos taurus
O70133 1.94e-30 133 34 2 219 1 Dhx9 ATP-dependent RNA helicase A Mus musculus
O70133 6.28e-18 92 31 4 189 1 Dhx9 ATP-dependent RNA helicase A Mus musculus
Q08211 1.94e-30 133 35 2 219 1 DHX9 ATP-dependent RNA helicase A Homo sapiens
Q08211 7.27e-21 102 31 4 189 1 DHX9 ATP-dependent RNA helicase A Homo sapiens
Q5R874 2.12e-30 133 35 2 219 2 DHX9 ATP-dependent RNA helicase A Pongo abelii
Q5R874 7.85e-21 102 31 4 189 2 DHX9 ATP-dependent RNA helicase A Pongo abelii
Q68FK8 2.01e-29 129 35 2 219 2 dhx9 ATP-dependent RNA helicase A protein Xenopus laevis
Q68FK8 4.48e-23 109 31 4 189 2 dhx9 ATP-dependent RNA helicase A protein Xenopus laevis
Q6P158 6.38e-28 125 41 5 199 1 DHX57 Putative ATP-dependent RNA helicase DHX57 Homo sapiens
Q6P158 1.4e-26 120 35 5 227 1 DHX57 Putative ATP-dependent RNA helicase DHX57 Homo sapiens
F4IDQ6 3.45e-27 122 35 3 224 1 NIH DExH-box ATP-dependent RNA helicase DExH2 Arabidopsis thaliana
F4IDQ6 1.3e-21 105 34 3 186 1 NIH DExH-box ATP-dependent RNA helicase DExH2 Arabidopsis thaliana
Q7Z478 7.99e-27 121 31 5 255 1 DHX29 ATP-dependent RNA helicase DHX29 Homo sapiens
Q7Z478 3.49e-23 110 32 4 236 1 DHX29 ATP-dependent RNA helicase DHX29 Homo sapiens
P24785 2.86e-26 119 33 3 240 1 mle Dosage compensation regulator mle Drosophila melanogaster
P24785 6.95e-22 105 34 4 189 1 mle Dosage compensation regulator mle Drosophila melanogaster
F4INY4 6.33e-26 118 32 6 259 2 HVT1 DExH-box ATP-dependent RNA helicase DExH6 Arabidopsis thaliana
F4INY4 3.76e-25 116 33 3 186 2 HVT1 DExH-box ATP-dependent RNA helicase DExH6 Arabidopsis thaliana
Q6P5D3 1.13e-25 117 35 5 226 1 Dhx57 Putative ATP-dependent RNA helicase DHX57 Mus musculus
Q6P5D3 1.58e-25 117 39 5 193 1 Dhx57 Putative ATP-dependent RNA helicase DHX57 Mus musculus
Q05B79 6.28e-25 115 32 4 238 1 DHX36 ATP-dependent DNA/RNA helicase DHX36 Bos taurus
Q05B79 1.08e-23 111 39 4 168 1 DHX36 ATP-dependent DNA/RNA helicase DHX36 Bos taurus
Q1EHT7 7.91e-25 115 29 11 353 2 Os01g0256800 Zinc finger CCCH domain-containing protein 4 Oryza sativa subsp. japonica
Q8VHK9 8.58e-25 114 32 4 238 1 Dhx36 ATP-dependent DNA/RNA helicase DHX36 Mus musculus
Q8VHK9 2.85e-23 110 38 4 168 1 Dhx36 ATP-dependent DNA/RNA helicase DHX36 Mus musculus
D4A2Z8 1.53e-24 114 32 4 238 1 Dhx36 ATP-dependent DNA/RNA helicase DHX36 Rattus norvegicus
D4A2Z8 3.26e-23 109 38 4 168 1 Dhx36 ATP-dependent DNA/RNA helicase DHX36 Rattus norvegicus
B2RR83 1.58e-24 114 31 6 269 1 Ythdc2 3'-5' RNA helicase YTHDC2 Mus musculus
B2RR83 4.97e-23 109 36 3 184 1 Ythdc2 3'-5' RNA helicase YTHDC2 Mus musculus
Q5R746 1.58e-24 114 35 4 218 2 YTHDC2 3'-5' RNA helicase YTHDC2 Pongo abelii
Q5R746 4.82e-23 109 36 3 184 2 YTHDC2 3'-5' RNA helicase YTHDC2 Pongo abelii
Q9H6S0 1.62e-24 114 35 4 218 1 YTHDC2 3'-5' RNA helicase YTHDC2 Homo sapiens
Q9H6S0 5.57e-23 109 36 3 184 1 YTHDC2 3'-5' RNA helicase YTHDC2 Homo sapiens
F4HYJ7 2.52e-24 113 38 2 181 3 At1g48650 DExH-box ATP-dependent RNA helicase DExH3 Arabidopsis thaliana
F4HYJ7 1.54e-20 101 34 3 240 3 At1g48650 DExH-box ATP-dependent RNA helicase DExH3 Arabidopsis thaliana
Q9H2U1 3.46e-24 112 33 3 225 1 DHX36 ATP-dependent DNA/RNA helicase DHX36 Homo sapiens
Q9H2U1 4.76e-24 112 39 4 168 1 DHX36 ATP-dependent DNA/RNA helicase DHX36 Homo sapiens
Q9C6G0 4.16e-24 112 35 4 209 3 At1g58050 DExH-box ATP-dependent RNA helicase DExH4, chloroplastic Arabidopsis thaliana
Q9C6G0 8.34e-18 92 34 5 193 3 At1g58050 DExH-box ATP-dependent RNA helicase DExH4, chloroplastic Arabidopsis thaliana
F4I9Q5 4.63e-24 112 33 3 222 2 At1g58060 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic Arabidopsis thaliana
F4I9Q5 7.49e-22 105 36 3 193 2 At1g58060 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic Arabidopsis thaliana
Q9C813 7.41e-24 112 29 6 262 2 FAS4 ATP-dependent RNA helicase DEAH13 Arabidopsis thaliana
Q9C813 7.94e-23 108 34 3 217 2 FAS4 ATP-dependent RNA helicase DEAH13 Arabidopsis thaliana
Q6PGC1 2.94e-23 110 29 5 255 1 Dhx29 ATP-dependent RNA helicase DHX29 Mus musculus
Q6PGC1 1.83e-22 107 32 4 236 1 Dhx29 ATP-dependent RNA helicase DHX29 Mus musculus
O60114 3.51e-23 110 33 3 209 3 SPBC15C4.05 Uncharacterized helicase C15C4.05 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
O60114 3.52e-20 100 33 3 180 3 SPBC15C4.05 Uncharacterized helicase C15C4.05 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q8IY37 3.86e-23 109 32 9 242 1 DHX37 Probable ATP-dependent RNA helicase DHX37 Homo sapiens
Q8IY37 4.86e-18 93 32 3 204 1 DHX37 Probable ATP-dependent RNA helicase DHX37 Homo sapiens
Q04217 6.27e-23 108 29 8 252 1 ECM16 Probable ATP-dependent RNA helicase DHR1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q04217 1.79e-22 107 33 2 195 1 ECM16 Probable ATP-dependent RNA helicase DHR1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O46072 2e-22 107 32 7 227 1 kz Probable ATP-dependent RNA helicase kurz Drosophila melanogaster
O46072 5.41e-18 93 34 1 159 1 kz Probable ATP-dependent RNA helicase kurz Drosophila melanogaster
Q22307 5.3e-22 106 36 7 177 2 rha-1 ATP-dependent RNA helicase A Caenorhabditis elegans
Q22307 3.31e-16 87 34 5 214 2 rha-1 ATP-dependent RNA helicase A Caenorhabditis elegans
P34305 1.1e-21 105 34 4 213 3 rha-2 Putative ATP-dependent RNA helicase rha-2 Caenorhabditis elegans
P34305 8.49e-20 99 31 8 218 3 rha-2 Putative ATP-dependent RNA helicase rha-2 Caenorhabditis elegans
Q924H9 2.08e-20 100 26 10 464 2 Dqx1 ATP-dependent RNA helicase DQX1 Mus musculus
Q8V9U2 1.08e-19 98 25 20 457 3 Mal-080 Putative RNA Helicase B962L African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983)
P0C9A4 1.15e-19 98 25 19 455 3 Ken-084 Putative RNA Helicase B962L African swine fever virus (isolate Pig/Kenya/KEN-50/1950)
Q89443 1.31e-18 94 25 19 434 2 Ba71V-072 Putative RNA helicase B962L African swine fever virus (strain Badajoz 1971 Vero-adapted)
P0C9A2 1.44e-18 94 24 18 434 3 Pret-084 Putative RNA Helicase B962L African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996)
O22243 1.56e-18 94 25 7 398 2 At2g47680 DExH-box ATP-dependent RNA helicase DExH8 Arabidopsis thaliana
P0C9A3 1.62e-18 94 24 18 434 3 War-082 Putative RNA Helicase B962L African swine fever virus (isolate Warthog/Namibia/Wart80/1980)
Q8TE96 1.05e-17 91 26 9 376 1 DQX1 ATP-dependent RNA helicase DQX1 Homo sapiens
Q3ZBE0 5.09e-16 86 27 9 376 2 DQX1 ATP-dependent RNA helicase DQX1 Bos taurus
P17766 6.21e-15 83 28 12 324 3 None Genome polyprotein Plum pox potyvirus (isolate NAT)
Q84934 6.59e-15 83 27 12 324 3 None Genome polyprotein Plum pox potyvirus (strain SK 68)
P13529 7.81e-15 83 28 12 321 1 None Genome polyprotein Plum pox potyvirus (strain D)
P17767 7.95e-15 83 28 12 321 1 None Genome polyprotein Plum pox potyvirus (strain Rankovic)
Q8BZS9 6.41e-14 79 24 9 416 1 Dhx32 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 Mus musculus
Q6XW15 1.34e-13 79 25 18 418 3 None Genome polyprotein Beet mosaic virus
Q90069 1.35e-13 79 26 12 321 3 None Genome polyprotein Soybean mosaic virus (strain G2)
P21231 1.53e-13 79 26 12 321 1 None Genome polyprotein Soybean mosaic virus (strain N)
Q5XH12 1.9e-13 78 22 10 434 2 dhx32 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 Xenopus laevis
Q01206 2.51e-13 78 26 16 350 3 None Genome polyprotein 1 Barley yellow mosaic virus (strain Japanese II-1)
Q04574 2.86e-13 78 26 14 339 3 None Genome polyprotein 1 Barley yellow mosaic virus (isolate Germany)
Q7L7V1 6.09e-13 76 23 9 415 1 DHX32 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 Homo sapiens
Q01901 9.44e-13 76 25 14 334 3 None Genome polyprotein Papaya ringspot virus (strain P / mutant HA)
O36979 1.35e-12 75 26 14 356 3 None Genome polyprotein Zucchini yellow mosaic virus (strain Singapore)
Q5UR20 1.57e-12 75 22 12 416 3 MIMI_R366 Putative ATP-dependent RNA helicase R366 Acanthamoeba polyphaga mimivirus
Q85197 1.69e-12 75 27 13 333 1 None Genome polyprotein Potato virus A
Q89330 2.1e-12 75 25 14 356 3 None Genome polyprotein Zucchini yellow mosaic virus (strain Reunion Island)
O11436 7.67e-12 73 25 13 344 1 None Genome polyprotein Ryegrass mosaic virus (isolate Denmark/Danish)
Q9YJW3 2.13e-11 72 26 16 345 3 None Genome polyprotein 1 Barley yellow mosaic virus (isolate China/Yancheng/1998)
Q65399 2.39e-11 71 26 14 344 2 None Genome polyprotein Bean common mosaic necrosis virus (strain NL-3)
O72904 3.31e-11 70 24 12 347 3 NPH2 RNA helicase NPH-II Fowlpox virus (strain NVSL)
P04517 3.54e-10 67 23 14 392 1 None Genome polyprotein Tobacco etch virus
P17765 4.41e-10 67 24 11 319 3 None Genome polyprotein Bean yellow mosaic virus
P18479 5.46e-10 67 25 14 344 1 None Genome polyprotein Zucchini yellow mosaic virus (strain California)
P18247 1.39e-09 65 26 14 321 1 None Genome polyprotein Potato virus Y (strain N)
P21530 2.62e-09 65 24 14 320 1 None Genome polyprotein Classical swine fever virus (strain Brescia)
Q02963 2.68e-09 65 26 14 322 3 None Genome polyprotein Potato virus Y (strain Hungarian)
O56075 4.66e-09 64 24 12 326 3 None Genome polyprotein Peanut mottle virus (strain M)
Q9JFC3 5.31e-09 63 24 15 350 2 OPG084 RNA helicase NPH-II Vaccinia virus (strain Tian Tan)
P12927 6.26e-09 63 24 15 350 1 OPG084 RNA helicase NPH-II Vaccinia virus (strain Western Reserve)
P90245 7.18e-09 63 28 13 316 3 None Genome polyprotein 1 Barley mild mosaic virus (strain Na1)
O57193 8.97e-09 62 24 15 350 2 OPG084 RNA helicase NPH-II Vaccinia virus (strain Ankara)
P20502 9.69e-09 62 24 15 350 2 OPG084 RNA helicase NPH-II Vaccinia virus (strain Copenhagen)
P19712 1.17e-08 63 23 14 319 1 None Genome polyprotein Classical swine fever virus (strain Alfort/Tuebingen)
P0DSU6 1.48e-08 62 24 15 350 2 OPG084 RNA helicase NPH-II Variola virus
A0A7H0DN56 1.64e-08 62 24 15 348 3 OPG084 RNA helicase NPH-II Monkeypox virus
P89509 3.81e-08 61 25 15 354 1 None Genome polyprotein Turnip mosaic virus (strain Japanese)
Q01500 3.84e-08 61 25 19 391 1 None Genome polyprotein Pepper mottle virus (isolate California)
P0DSU5 6.97e-08 60 24 15 350 2 OPG084 RNA helicase NPH-II Variola virus (isolate Human/India/Ind3/1967)
Q02597 8.6e-08 60 24 15 354 1 None Genome polyprotein Turnip mosaic virus (strain Quebec)
P89201 1.19e-07 59 25 12 322 2 None Genome polyprotein Sweet potato mild mottle virus (isolate Salazar)
P29152 3.14e-07 58 26 15 337 1 None Genome polyprotein Pea seed-borne mosaic virus (strain DPD1)
P31999 3.89e-07 58 24 11 337 2 None Genome polyprotein Lettuce mosaic virus (strain 0 / isolate French)
Q96662 3.97e-07 58 23 13 318 1 None Genome polyprotein Bovine viral diarrhea virus (strain CP7)
Q01499 8.65e-07 57 23 13 318 1 None Genome polyprotein Bovine viral diarrhea virus (strain SD-1)
P19711 9.66e-07 56 22 13 318 1 None Genome polyprotein Bovine viral diarrhea virus (isolate NADL)
Q58083 1.69e-06 54 25 13 324 1 MJ0669 Probable ATP-dependent RNA helicase MJ0669 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q10RI7 1.91e-06 55 22 15 358 3 Os03g0158200 DEAD-box ATP-dependent RNA helicase 38 Oryza sativa subsp. japonica
Q98218 9.1e-06 53 27 8 228 3 NPH2 RNA helicase NPH-II Molluscum contagiosum virus subtype 1
A4KZ49 0.00011 50 23 13 333 1 None Genome polyprotein Triticum mosaic virus (isolate Triticum aestivum/United States/U06-123/2006)
Q9W1I2 0.000802 47 25 4 151 1 bgcn Benign gonial cell neoplasm protein Drosophila melanogaster

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12960
Feature type CDS
Gene hrpB
Product ATP-dependent helicase HrpB
Location 203262 - 205712 (strand: -1)
Length 2451 (nucleotides) / 816 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1311
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00270 DEAD/DEAH box helicase
PF00271 Helicase conserved C-terminal domain
PF08482 ATP-dependent helicase C-terminal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1643 Translation, ribosomal structure and biogenesis (J) J HrpA-like RNA helicase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03579 ATP-dependent helicase HrpB [EC:3.6.4.13] - -

Protein Sequence

MTYSPVCNIYPALSAALRHAPQVLLQAPTGSGKSTVLPLLMLDDESVTGRIIMLEPRRIAARSVAHRLASQRGEKVGETVGYRMRGETRVSKMTQIEVVTEGILVRMLQQDPELSDVDIIILDEFHERSLQADLALALLLDVQSSLRSDLRLLIMSATLNNEQLLSLLPDAEVITAEGRAFPVERRWQPLNPHQPFISEVARHVLQLYQQASGSVLVFLPGRAEICRLQEQLTGKTDADTLICPLYGALTLDEQQKAIEPPPAGMRKIVLATNIAETSLTIEGVTLVVDSCQEKVAQFDPRSGLTRLVRSRISRAAMTQRAGRAGRLSPGICLHLCGQAEAERAAAHSEPEICHTDLSGLMLNLAQWGCREVSQLCWLDTPPAVAVRVAQKLLTDMGCLLPQGGLTAKGEAMAGAGTEPRHAALWLYTLNEFPQQIYWAARLIAVLEEPPREGNGNLLHDLTHPSARWDKRAQQLLSAAGLPVRKPAQPPDNDWLCRTLLQGFPDRIAGNRGRFGIFQLANGVGAVTDESSPLGNENGLVAPLILQNEQYANARILRAVPFELSQLQDIAPHLLKTENRLTRDESRGTWQAWRAVTCGQLIIERRQLAAPSADIVREALLGWIGEQGLSVLTWRDESQQLLIRLQLAKIWFPEKTLPGGDDETLRETLAVWLSPYLNNVRNQQQLAGIDLYGALRQRLDWSQQQWLDTQFPRHFDVPTGSRIPVEYTLDKPPVMAVRIQEMYGVGETPSVAQGRLPVTVSLLSPAHRPIQVTADLKAFWAGSYREVQKEMKGRYPKHFWPDDPANAQPTKRVKKFM

Flanking regions ( +/- flanking 50bp)

ATGCTACAATGTTGCGCGTCGAAAGTTAAGCAGAAGATGATGAGGTTTTTGTGACATATTCCCCCGTTTGTAACATTTACCCTGCGCTGAGTGCCGCACTCAGGCATGCGCCACAGGTATTATTACAGGCACCGACCGGCAGTGGTAAGTCCACCGTATTGCCCTTACTTATGCTTGATGATGAATCAGTTACCGGGCGGATTATTATGCTGGAACCCCGCCGTATCGCGGCCCGCAGCGTAGCGCACCGGCTGGCATCACAGCGCGGGGAAAAGGTGGGTGAGACTGTCGGTTACCGGATGCGCGGCGAAACCCGGGTCAGCAAAATGACACAAATAGAAGTTGTAACAGAAGGCATTTTAGTCCGGATGTTACAGCAAGATCCGGAATTATCTGACGTAGATATTATTATTCTGGATGAATTTCATGAACGCAGTTTGCAGGCTGATCTCGCTCTTGCACTACTATTAGATGTGCAATCTTCACTGCGCAGTGATTTGCGGCTGCTGATTATGTCCGCCACATTAAATAATGAACAATTATTATCTCTGCTGCCGGATGCTGAAGTGATCACCGCCGAAGGCCGCGCATTCCCTGTTGAGCGGCGCTGGCAGCCTCTCAATCCGCATCAGCCGTTTATCAGCGAAGTTGCCCGTCATGTATTACAGTTGTATCAGCAGGCGTCCGGGTCTGTACTGGTCTTTTTGCCGGGACGCGCTGAGATTTGCCGGTTACAAGAGCAACTGACCGGGAAAACGGATGCGGACACACTTATCTGCCCGTTGTACGGGGCGCTCACCCTTGATGAGCAGCAGAAGGCAATTGAACCGCCGCCTGCGGGAATGCGTAAAATTGTACTGGCAACCAATATTGCGGAAACCAGCCTGACAATAGAAGGTGTCACCCTGGTGGTGGACAGTTGTCAGGAAAAAGTGGCTCAGTTTGATCCGCGCAGCGGGCTGACCCGTCTGGTGCGCAGCCGGATAAGCCGTGCCGCCATGACTCAGCGCGCGGGACGTGCCGGGCGCCTGAGTCCCGGGATTTGCCTGCATCTGTGCGGGCAGGCGGAGGCAGAGCGGGCGGCGGCACACAGTGAGCCGGAAATCTGTCACACGGATTTATCCGGATTAATGCTGAACCTGGCACAGTGGGGCTGCCGTGAGGTTTCTCAGCTGTGCTGGCTTGATACCCCTCCTGCGGTTGCGGTGCGCGTTGCACAAAAATTGCTGACAGATATGGGCTGCCTTCTGCCGCAGGGCGGGCTGACGGCAAAAGGCGAAGCGATGGCGGGAGCCGGTACTGAGCCCCGCCATGCGGCATTGTGGTTATATACGCTGAATGAATTTCCACAGCAGATTTATTGGGCGGCACGATTGATTGCCGTACTGGAAGAACCGCCGCGTGAGGGGAACGGGAACCTGCTGCATGATTTGACTCACCCGTCTGCGCGTTGGGACAAGAGGGCTCAGCAATTACTGAGTGCCGCAGGGCTGCCGGTCAGAAAACCGGCACAACCGCCGGACAATGACTGGCTGTGCCGCACCTTATTACAGGGATTTCCTGATCGCATTGCCGGTAACCGCGGACGTTTTGGTATTTTTCAGCTGGCAAACGGCGTGGGTGCGGTCACAGATGAAAGCAGCCCGCTCGGCAATGAAAACGGGCTGGTAGCCCCGCTTATCTTACAAAATGAACAATATGCCAATGCGCGCATTCTGCGCGCAGTGCCGTTTGAACTGTCACAATTGCAGGATATCGCCCCGCATCTGCTGAAAACAGAGAACCGGCTGACCCGTGATGAGAGTCGCGGAACATGGCAGGCGTGGCGGGCAGTCACCTGCGGTCAGCTGATTATTGAGCGCAGACAACTTGCTGCGCCCTCTGCTGACATTGTCCGTGAAGCCTTGCTGGGCTGGATAGGCGAGCAGGGTTTATCCGTGCTGACGTGGCGTGATGAGAGTCAGCAGTTGCTCATCCGCTTACAGTTAGCGAAAATCTGGTTCCCGGAGAAAACGCTGCCGGGAGGGGATGATGAAACACTACGGGAAACGCTTGCGGTCTGGCTCTCTCCTTATCTGAATAATGTGCGCAATCAGCAGCAGCTTGCGGGAATTGATCTGTATGGTGCATTGCGCCAGCGTCTTGACTGGTCACAGCAGCAGTGGCTGGATACACAGTTTCCCCGCCATTTTGATGTTCCCACCGGCTCGCGGATCCCGGTAGAATATACATTAGATAAACCACCTGTTATGGCAGTACGTATTCAGGAGATGTATGGTGTGGGTGAAACACCGTCTGTGGCGCAGGGTCGTCTGCCGGTGACAGTCAGTCTGCTGTCTCCCGCGCACCGTCCGATTCAGGTCACCGCAGACCTGAAAGCGTTTTGGGCAGGGAGCTACAGGGAGGTACAAAAAGAGATGAAAGGACGTTATCCCAAGCATTTCTGGCCTGATGATCCGGCAAACGCGCAACCGACCAAGCGTGTAAAAAAGTTTATGTAAATGCAAAGATTGCTTTTTTTAACGCGATTTTTGCTGTGTCTGTCGCCGGA