Orthogroup:group_1311


Homologs in group_1311

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08030 FBDBKF_08030 Morganella morganii S1 hrpB ATP-dependent helicase HrpB
EHELCC_13860 EHELCC_13860 Morganella morganii S2 hrpB ATP-dependent helicase HrpB
NLDBIP_14305 NLDBIP_14305 Morganella morganii S4 hrpB ATP-dependent helicase HrpB
LHKJJB_08545 LHKJJB_08545 Morganella morganii S3 hrpB ATP-dependent helicase HrpB
HKOGLL_08095 HKOGLL_08095 Morganella morganii S5 hrpB ATP-dependent helicase HrpB
F4V73_RS12960 F4V73_RS12960 Morganella psychrotolerans hrpB ATP-dependent helicase HrpB
PMI_RS00975 PMI_RS00975 Proteus mirabilis HI4320 hrpB ATP-dependent helicase HrpB

Distribution of group_1311 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1311 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1311

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1311.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hrpB 7

Product

# Product Occurence
1 ATP-dependent helicase HrpB 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1643 7 J Translation, ribosomal structure and biogenesis (J) HrpA-like RNA helicase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03579 7 ATP-dependent helicase HrpB [EC:3.6.4.13] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00270 7 DEAD/DEAH box helicase
PF00271 7 Helicase conserved C-terminal domain
PF08482 7 ATP-dependent helicase C-terminal

Annotations of the 192 SwissProt hits

Annotation Number of occurrences
3'-5' RNA helicase YTHDC2 3
ATP-dependent DNA helicase Hel308 1
ATP-dependent DNA/RNA helicase DHX36 4
ATP-dependent RNA helicase A 5
ATP-dependent RNA helicase A protein 1
ATP-dependent RNA helicase DEAH11, chloroplastic 1
ATP-dependent RNA helicase DEAH12, chloroplastic 1
ATP-dependent RNA helicase DEAH13 1
ATP-dependent RNA helicase DHX15 3
ATP-dependent RNA helicase DHX15 homolog 1
ATP-dependent RNA helicase DHX29 2
ATP-dependent RNA helicase DHX30 6
ATP-dependent RNA helicase DHX33 3
ATP-dependent RNA helicase DHX8 3
ATP-dependent RNA helicase DQX1 3
ATP-dependent RNA helicase HrpA 2
ATP-dependent RNA helicase HrpA homolog 1
ATP-dependent RNA helicase HrpB 1
ATP-dependent RNA helicase SrmB 1
ATP-dependent RNA helicase TDRD9 4
ATP-dependent RNA helicase dhx29 1
ATP-dependent RNA helicase dhx8 1
ATP-dependent rRNA helicase RRP3 1
ATP-dependent rRNA helicase rrp3 1
Activating signal cointegrator 1 complex subunit 3 1
Benign gonial cell neoplasm protein 1
DEAD-box ATP-dependent RNA helicase 38 1
DExH-box ATP-dependent RNA helicase DExH1 1
DExH-box ATP-dependent RNA helicase DExH12 1
DExH-box ATP-dependent RNA helicase DExH2 1
DExH-box ATP-dependent RNA helicase DExH3 1
DExH-box ATP-dependent RNA helicase DExH4, chloroplastic 1
DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 1
DExH-box ATP-dependent RNA helicase DExH6 1
DExH-box ATP-dependent RNA helicase DExH7, chloroplastic 1
DExH-box ATP-dependent RNA helicase DExH8 1
Dosage compensation regulator mle 1
Genome polyprotein 33
Genome polyprotein 1 4
Nucleolar RNA helicase 2 2
Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 1
Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 1
Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 1
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 3
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 3
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 1
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 1
Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 1
Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 1
Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 1
Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 1
Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28 1
Probable ATP-dependent RNA helicase DHR1 1
Probable ATP-dependent RNA helicase DHR2 1
Probable ATP-dependent RNA helicase DHX34 2
Probable ATP-dependent RNA helicase DHX35 2
Probable ATP-dependent RNA helicase DHX35 homolog 1
Probable ATP-dependent RNA helicase DHX37 1
Probable ATP-dependent RNA helicase DHX40 4
Probable ATP-dependent RNA helicase MJ0669 1
Probable ATP-dependent RNA helicase kurz 1
Probable ATP-dependent RNA helicase prh1 1
Probable ATP-dependent RNA helicase spindle-E 14
Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 1
Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 1
Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 1
Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 1
Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 1
Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 1
Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 1
Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 1
Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 1
Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 1
Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43 1
Putative ATP-dependent RNA helicase DHX15 1
Putative ATP-dependent RNA helicase DHX57 2
Putative ATP-dependent RNA helicase L540 1
Putative ATP-dependent RNA helicase PB1A10.06c 1
Putative ATP-dependent RNA helicase R366 1
Putative ATP-dependent RNA helicase YLR419W 1
Putative ATP-dependent RNA helicase rha-2 1
Putative ATP-dependent RNA helicase ucp12 1
Putative DEAH-box ATP-dependent helicase UM11114 1
Putative RNA Helicase B962L 4
Putative RNA helicase B962L 1
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 1
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 1
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 3
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 (Fragment) 1
RNA editing associated helicase 2 1
RNA helicase NPH-II 9
Uncharacterized helicase C15C4.05 1
Zinc finger CCCH domain-containing protein 4 1

Protein length

Min length 809
Max length 816
Mean length (sd) 815.0 (2.6)
Median length 816.0

Protein length distribution