Homologs in group_1846

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13805 FBDBKF_13805 79.0 Morganella morganii S1 - Late embryogenesis abundant protein
EHELCC_11475 EHELCC_11475 79.0 Morganella morganii S2 - Late embryogenesis abundant protein
NLDBIP_11820 NLDBIP_11820 79.0 Morganella morganii S4 - Late embryogenesis abundant protein
LHKJJB_11680 LHKJJB_11680 79.0 Morganella morganii S3 - Late embryogenesis abundant protein
HKOGLL_10290 HKOGLL_10290 79.0 Morganella morganii S5 - Late embryogenesis abundant protein
PMI_RS01215 PMI_RS01215 44.6 Proteus mirabilis HI4320 - hypothetical protein

Distribution of the homologs in the orthogroup group_1846

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1846

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O67622 1.69e-05 47 27 2 164 3 rny Ribonuclease Y Aquifex aeolicus (strain VF5)
Q6TMJ3 5.66e-05 45 31 2 129 2 sigJ SrfA-induced gene J protein Dictyostelium discoideum

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12670
Feature type CDS
Gene -
Product hypothetical protein
Location 131940 - 132476 (strand: 1)
Length 537 (nucleotides) / 178 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1846
Orthogroup size 7
N. genomes 7

Actions

Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4980 General function prediction only (R) R Gas vesicle protein YhaH

Protein Sequence

MKKTLLSSLILAGVFIFATGCDDSSKTDPAAQKAQEGAAQIKDAAEQKAGELKQDAKDVANETEKKADELKQDAKEKTGAVIDDAKEKAADIRNEADKKADELKKEADNILSDAKDKGEDAKKAAEEKATELKKEAADAKEAAEKKADELKTQATEKKDELKQDLSDKLGDAQKALNQ

Flanking regions ( +/- flanking 50bp)

CAGATATCTATCTGGTTATTTTACTCAACGTTTTTCGAAGAGGGTTAATCATGAAAAAGACATTATTAAGTTCACTGATCCTGGCGGGTGTTTTTATTTTTGCAACCGGCTGTGATGACAGCAGTAAAACCGATCCTGCCGCACAGAAGGCGCAGGAAGGTGCTGCACAGATTAAGGATGCAGCGGAACAGAAAGCAGGCGAACTGAAACAAGACGCCAAAGATGTCGCAAATGAGACTGAAAAGAAAGCGGATGAACTGAAGCAGGATGCAAAAGAGAAAACAGGTGCGGTCATCGATGATGCCAAAGAGAAAGCCGCCGATATCCGTAATGAGGCGGATAAAAAAGCCGATGAACTAAAGAAAGAAGCGGATAATATTCTCAGTGACGCCAAAGACAAAGGCGAAGACGCTAAAAAAGCGGCTGAAGAAAAAGCAACAGAGCTGAAAAAGGAAGCTGCTGACGCAAAAGAGGCCGCAGAGAAAAAAGCGGATGAGCTGAAAACACAAGCCACAGAGAAAAAAGACGAACTGAAACAAGACCTGTCTGACAAACTCGGTGATGCACAAAAAGCGCTGAACCAGTAATAATCCGTAAAATAAAGACGAGCCGGAAATCAATAATGTTTCCGGCTTTT