Homologs in group_1846

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13805 FBDBKF_13805 46.5 Morganella morganii S1 - Late embryogenesis abundant protein
EHELCC_11475 EHELCC_11475 46.5 Morganella morganii S2 - Late embryogenesis abundant protein
NLDBIP_11820 NLDBIP_11820 46.5 Morganella morganii S4 - Late embryogenesis abundant protein
LHKJJB_11680 LHKJJB_11680 46.5 Morganella morganii S3 - Late embryogenesis abundant protein
HKOGLL_10290 HKOGLL_10290 46.5 Morganella morganii S5 - Late embryogenesis abundant protein
F4V73_RS12670 F4V73_RS12670 44.6 Morganella psychrotolerans - hypothetical protein

Distribution of the homologs in the orthogroup group_1846

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1846

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
E2RE76 7.93e-09 58 29 5 182 3 APOA4 Apolipoprotein A-IV Canis lupus familiaris
P0DSO8 1.08e-07 54 27 5 195 3 APOA4 Apolipoprotein A-IV Acinonyx jubatus
M3W955 1.97e-07 53 27 5 195 3 APOA4 Apolipoprotein A-IV Felis catus
P0DTS1 1.93e-06 50 29 6 165 3 APOA4 Apolipoprotein A-IV Phoca vitulina
P0DTS1 0.000199 45 25 3 174 3 APOA4 Apolipoprotein A-IV Phoca vitulina
P0DTS0 1.93e-06 50 29 6 165 3 APOA4 Apolipoprotein A-IV Mirounga angustirostris
P0DTS0 0.000199 45 25 3 174 3 APOA4 Apolipoprotein A-IV Mirounga angustirostris
Q28758 2.09e-05 47 25 3 170 2 APOA4 Apolipoprotein A-IV (Fragment) Papio anubis
Q9LF88 2.23e-05 47 32 7 192 2 At3g53040 Late embryogenesis abundant protein At3g53040 Arabidopsis thaliana
Q9LF88 0.000482 43 32 2 168 2 At3g53040 Late embryogenesis abundant protein At3g53040 Arabidopsis thaliana
A0A2U3YVN9 2.58e-05 47 28 5 160 3 APOA4 Apolipoprotein A-IV Leptonychotes weddellii
A0A2U3YVN9 4.26e-05 47 24 4 190 3 APOA4 Apolipoprotein A-IV Leptonychotes weddellii
A0A2Y9HKB5 3.16e-05 47 28 5 160 3 APOA4 Apolipoprotein A-IV Neomonachus schauinslandi
A0A2Y9HKB5 4.1e-05 47 24 4 190 3 APOA4 Apolipoprotein A-IV Neomonachus schauinslandi
P33621 3.93e-05 47 25 3 170 2 APOA4 Apolipoprotein A-IV Macaca fascicularis
P06727 7.48e-05 46 28 2 139 1 APOA4 Apolipoprotein A-IV Homo sapiens
P32918 0.000254 44 24 4 149 1 APOA1 Apolipoprotein A-I Coturnix japonica
Q95V77 0.00034 42 33 0 96 2 None Late embryogenesis abundant protein 1 Aphelenchus avenae
Q32PJ2 0.000612 43 21 1 190 2 APOA4 Apolipoprotein A-IV Bos taurus
P09809 0.001 42 23 2 125 1 APOA1 Apolipoprotein A-I Oryctolagus cuniculus

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01215
Feature type CDS
Gene -
Product hypothetical protein
Location 298652 - 299287 (strand: -1)
Length 636 (nucleotides) / 211 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1846
Orthogroup size 7
N. genomes 7

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4913 Function unknown (S) S Uncharacterized conserved protein, contains a C-terminal ATPase domain

Protein Sequence

MNKKLLASLILAGLVTITAGCDDSSKKVDEGIDKAKETATQVNETAQDKAKELTDQAKEKAADLKESASATADELKQDAAKLKEQAEDKAAELKAQADQKTDALKESIAQKTDELKDSASAKADEIKQSLNNESDKLAGKAEEVKQNANTTADNLKQNASDKAAQLKEDAAKTSDDVKQQAQDTKDKALDKADELTDQAKQKIDSLKADNK

Flanking regions ( +/- flanking 50bp)

TTATGCGAGATATCATCGATATGTTTTGGATACATTCTCTGGAGAGAAACATGAACAAAAAATTACTGGCATCTTTAATTCTAGCAGGTCTTGTTACCATTACAGCAGGTTGTGATGATTCATCGAAAAAAGTGGATGAAGGTATTGATAAAGCAAAAGAGACAGCAACCCAAGTAAATGAAACGGCTCAAGACAAAGCAAAAGAATTAACAGATCAAGCTAAAGAAAAAGCCGCTGATTTAAAAGAGAGTGCATCAGCGACAGCTGACGAATTAAAACAAGATGCGGCCAAGCTAAAAGAGCAAGCTGAAGATAAAGCTGCAGAGCTTAAAGCACAAGCCGATCAAAAAACCGATGCATTAAAAGAGAGCATTGCACAAAAAACAGATGAACTAAAAGATTCTGCAAGTGCAAAAGCAGATGAAATCAAACAAAGTTTAAATAATGAAAGTGACAAACTGGCTGGTAAAGCAGAAGAAGTGAAACAAAACGCTAATACCACTGCAGATAACTTAAAACAAAATGCTAGCGACAAAGCAGCGCAACTAAAAGAAGATGCGGCTAAAACCAGTGATGATGTAAAACAGCAAGCGCAAGATACTAAAGATAAAGCGCTTGATAAAGCCGATGAGCTCACCGATCAAGCAAAGCAAAAAATTGATTCTCTAAAGGCTGATAATAAATAATTTCATTTCAGAAATTTTGATGTTGAAAAAGCCAGTAATATTTTACTGGC