Homologs in group_879

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04520 FBDBKF_04520 95.3 Morganella morganii S1 speA biosynthetic arginine decarboxylase
EHELCC_05810 EHELCC_05810 95.3 Morganella morganii S2 speA biosynthetic arginine decarboxylase
NLDBIP_06130 NLDBIP_06130 95.3 Morganella morganii S4 speA biosynthetic arginine decarboxylase
LHKJJB_03010 LHKJJB_03010 95.3 Morganella morganii S3 speA biosynthetic arginine decarboxylase
HKOGLL_06485 HKOGLL_06485 95.3 Morganella morganii S5 speA biosynthetic arginine decarboxylase
PMI_RS10315 PMI_RS10315 86.1 Proteus mirabilis HI4320 speA biosynthetic arginine decarboxylase

Distribution of the homologs in the orthogroup group_879

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_879

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7N121 0.0 1163 86 0 634 3 speA Biosynthetic arginine decarboxylase Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
B4F1A4 0.0 1152 86 0 634 3 speA Biosynthetic arginine decarboxylase Proteus mirabilis (strain HI4320)
Q8ZHG8 0.0 1089 81 1 634 3 speA Biosynthetic arginine decarboxylase Yersinia pestis
B5XUB1 0.0 1083 80 1 634 3 speA Biosynthetic arginine decarboxylase Klebsiella pneumoniae (strain 342)
P60659 0.0 1080 80 1 634 3 speA Biosynthetic arginine decarboxylase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P60658 0.0 1080 80 1 634 3 speA Biosynthetic arginine decarboxylase Salmonella typhi
P21170 0.0 1079 80 1 634 1 speA Biosynthetic arginine decarboxylase Escherichia coli (strain K12)
B4TV55 0.0 1079 80 1 634 3 speA Biosynthetic arginine decarboxylase Salmonella schwarzengrund (strain CVM19633)
A9N4N1 0.0 1079 80 1 634 3 speA Biosynthetic arginine decarboxylase Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B4T5J3 0.0 1079 80 1 634 3 speA Biosynthetic arginine decarboxylase Salmonella newport (strain SL254)
B4THH1 0.0 1079 80 1 634 3 speA Biosynthetic arginine decarboxylase Salmonella heidelberg (strain SL476)
Q57K30 0.0 1079 80 1 634 3 speA Biosynthetic arginine decarboxylase Salmonella choleraesuis (strain SC-B67)
B5F5L1 0.0 1079 80 1 634 3 speA Biosynthetic arginine decarboxylase Salmonella agona (strain SL483)
Q8FE34 0.0 1079 80 1 634 3 speA Biosynthetic arginine decarboxylase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8XCX9 0.0 1079 80 1 634 3 speA Biosynthetic arginine decarboxylase Escherichia coli O157:H7
B1LDE8 0.0 1078 80 1 634 3 speA Biosynthetic arginine decarboxylase Escherichia coli (strain SMS-3-5 / SECEC)
B5YQD6 0.0 1078 80 1 634 3 speA Biosynthetic arginine decarboxylase Escherichia coli O157:H7 (strain EC4115 / EHEC)
B5FUJ7 0.0 1077 80 1 634 3 speA Biosynthetic arginine decarboxylase Salmonella dublin (strain CT_02021853)
Q83Q93 0.0 1077 79 1 634 3 speA Biosynthetic arginine decarboxylase Shigella flexneri
Q0T0V3 0.0 1076 79 1 634 3 speA Biosynthetic arginine decarboxylase Shigella flexneri serotype 5b (strain 8401)
C4K6F4 0.0 953 71 1 634 3 speA Biosynthetic arginine decarboxylase Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT)
Q9CL60 0.0 946 69 1 626 3 speA Biosynthetic arginine decarboxylase Pasteurella multocida (strain Pm70)
Q9K0U3 0.0 897 67 1 628 3 speA Biosynthetic arginine decarboxylase Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9JT25 0.0 896 67 1 628 3 speA Biosynthetic arginine decarboxylase Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
A0KVN8 0.0 744 57 3 638 3 speA Biosynthetic arginine decarboxylase Shewanella sp. (strain ANA-3)
Q8EFU5 0.0 743 57 3 638 3 speA Biosynthetic arginine decarboxylase Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
Q0HW78 0.0 741 57 3 638 3 speA Biosynthetic arginine decarboxylase Shewanella sp. (strain MR-7)
Q0HJY2 0.0 741 57 3 638 3 speA Biosynthetic arginine decarboxylase Shewanella sp. (strain MR-4)
A1RKK8 0.0 741 56 3 638 3 speA Biosynthetic arginine decarboxylase Shewanella sp. (strain W3-18-1)
A4Y5Y9 0.0 741 56 3 638 3 speA Biosynthetic arginine decarboxylase Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
A6WM65 0.0 737 56 3 638 3 speA Biosynthetic arginine decarboxylase Shewanella baltica (strain OS185)
A3D3G2 0.0 737 56 3 638 3 speA Biosynthetic arginine decarboxylase Shewanella baltica (strain OS155 / ATCC BAA-1091)
B8EAI2 0.0 737 56 3 638 3 speA Biosynthetic arginine decarboxylase Shewanella baltica (strain OS223)
A9KY70 0.0 736 56 3 638 3 speA Biosynthetic arginine decarboxylase Shewanella baltica (strain OS195)
A8FWJ3 0.0 735 56 4 626 3 speA Biosynthetic arginine decarboxylase Shewanella sediminis (strain HAW-EB3)
B8CR70 0.0 735 56 4 630 3 speA Biosynthetic arginine decarboxylase Shewanella piezotolerans (strain WP3 / JCM 13877)
B0TQX3 0.0 732 56 3 627 3 speA Biosynthetic arginine decarboxylase Shewanella halifaxensis (strain HAW-EB4)
B1KRD4 0.0 730 56 3 626 3 speA Biosynthetic arginine decarboxylase Shewanella woodyi (strain ATCC 51908 / MS32)
Q12LW6 0.0 729 56 4 638 3 speA Biosynthetic arginine decarboxylase Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
A8H5G3 0.0 725 56 3 627 3 speA Biosynthetic arginine decarboxylase Shewanella pealeana (strain ATCC 700345 / ANG-SQ1)
A3QDD8 0.0 725 56 4 626 3 speA Biosynthetic arginine decarboxylase Shewanella loihica (strain ATCC BAA-1088 / PV-4)
Q083L6 0.0 724 56 3 626 3 speA Biosynthetic arginine decarboxylase Shewanella frigidimarina (strain NCIMB 400)
A1S712 0.0 719 56 4 626 3 speA Biosynthetic arginine decarboxylase Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
Q7MK24 0.0 718 55 4 631 1 speA Biosynthetic arginine decarboxylase Vibrio vulnificus (strain YJ016)
Q8DA54 0.0 718 55 4 631 3 speA Biosynthetic arginine decarboxylase Vibrio vulnificus (strain CMCP6)
A1TY02 0.0 718 55 3 639 3 speA Biosynthetic arginine decarboxylase Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8)
Q87JS8 0.0 711 55 4 631 3 speA Biosynthetic arginine decarboxylase Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q9KLD1 0.0 697 54 5 631 3 speA Biosynthetic arginine decarboxylase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A4SPD6 0.0 691 55 4 627 3 speA Biosynthetic arginine decarboxylase Aeromonas salmonicida (strain A449)
A0KIP8 0.0 690 55 4 627 3 speA Biosynthetic arginine decarboxylase Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
C4L9A9 0.0 688 54 6 634 3 speA Biosynthetic arginine decarboxylase Tolumonas auensis (strain DSM 9187 / NBRC 110442 / TA 4)
Q0ACK8 0.0 597 50 9 629 3 speA Biosynthetic arginine decarboxylase Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1)
Q8PFQ5 0.0 577 47 7 637 3 speA Biosynthetic arginine decarboxylase Xanthomonas axonopodis pv. citri (strain 306)
Q8P448 0.0 573 47 7 637 3 speA Biosynthetic arginine decarboxylase Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
Q87F25 0.0 553 45 7 627 3 speA Biosynthetic arginine decarboxylase Xylella fastidiosa (strain Temecula1 / ATCC 700964)
B2I6M1 0.0 553 45 7 627 3 speA Biosynthetic arginine decarboxylase Xylella fastidiosa (strain M23)
B0U1H6 0.0 551 45 7 627 3 speA Biosynthetic arginine decarboxylase Xylella fastidiosa (strain M12)
Q9PH02 0.0 547 45 7 627 3 speA Biosynthetic arginine decarboxylase Xylella fastidiosa (strain 9a5c)
Q87VU3 0.0 542 45 8 630 3 speA Biosynthetic arginine decarboxylase Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Q8A2B1 0.0 541 44 12 638 3 speA Biosynthetic arginine decarboxylase Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)
A6L012 0.0 541 44 13 639 3 speA Biosynthetic arginine decarboxylase Phocaeicola vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154)
Q7NU27 0.0 538 44 7 623 3 speA Biosynthetic arginine decarboxylase Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / CCUG 213 / NBRC 12614 / NCIMB 9131 / NCTC 9757 / MK)
Q64ZT8 0.0 536 45 12 638 3 speA Biosynthetic arginine decarboxylase Bacteroides fragilis (strain YCH46)
Q5LIQ3 0.0 536 45 12 638 3 speA Biosynthetic arginine decarboxylase Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / LMG 10263 / NCTC 9343 / Onslow / VPI 2553 / EN-2)
Q88QC7 0.0 533 44 8 629 3 speA Biosynthetic arginine decarboxylase Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q9HUX1 0.0 533 45 6 621 3 speA Biosynthetic arginine decarboxylase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q8DHY6 6.7e-167 494 41 12 636 3 speA Biosynthetic arginine decarboxylase Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)
Q7UTS2 2.34e-166 493 41 11 658 3 speA Biosynthetic arginine decarboxylase Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1)
Q7NE10 8.42e-165 489 41 10 639 3 speA Biosynthetic arginine decarboxylase Gloeobacter violaceus (strain ATCC 29082 / PCC 7421)
Q8YRP3 1.39e-164 489 41 10 630 3 speA Biosynthetic arginine decarboxylase Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
C6E3V4 6.13e-159 473 39 9 636 3 speA Biosynthetic arginine decarboxylase Geobacter sp. (strain M21)
A1AS90 1.91e-158 472 39 8 631 3 speA Biosynthetic arginine decarboxylase Pelobacter propionicus (strain DSM 2379 / NBRC 103807 / OttBd1)
B5EIW4 1.95e-158 472 39 10 637 3 speA Biosynthetic arginine decarboxylase Citrifermentans bemidjiense (strain ATCC BAA-1014 / DSM 16622 / JCM 12645 / Bem)
P74576 3.79e-158 473 41 13 653 3 speA1 Biosynthetic arginine decarboxylase 1 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
A5GB52 3.61e-157 469 41 11 633 3 speA Biosynthetic arginine decarboxylase Geotalea uraniireducens (strain Rf4)
B3EAF3 3.65e-155 464 40 9 634 3 speA Biosynthetic arginine decarboxylase Trichlorobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ)
B9M6H6 2.74e-152 456 40 8 632 3 speA Biosynthetic arginine decarboxylase Geotalea daltonii (strain DSM 22248 / JCM 15807 / FRC-32)
Q39X78 2.92e-152 456 39 8 634 3 speA Biosynthetic arginine decarboxylase Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15)
A0A4W3 1.53e-151 454 39 8 633 3 speA Biosynthetic arginine decarboxylase Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
P72587 3.73e-148 446 39 12 642 3 speA2 Biosynthetic arginine decarboxylase 2 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q7U3S0 3.49e-146 441 39 11 633 3 speA Biosynthetic arginine decarboxylase Parasynechococcus marenigrum (strain WH8102)
A5GWM2 1.82e-144 436 38 6 629 3 speA Biosynthetic arginine decarboxylase Synechococcus sp. (strain RCC307)
Q9RXR4 4.93e-144 436 38 10 635 3 speA Biosynthetic arginine decarboxylase Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
A2BU00 4.25e-143 433 34 9 633 3 speA Biosynthetic arginine decarboxylase Prochlorococcus marinus (strain MIT 9515)
A3PA96 3.09e-141 428 36 11 636 3 speA Biosynthetic arginine decarboxylase Prochlorococcus marinus (strain MIT 9301)
Q31DD8 1.25e-140 427 36 11 636 3 speA Biosynthetic arginine decarboxylase Prochlorococcus marinus (strain MIT 9312)
A8G243 1.37e-140 427 35 11 636 3 speA Biosynthetic arginine decarboxylase Prochlorococcus marinus (strain MIT 9215)
Q7V3M9 2.15e-140 426 34 9 633 3 speA Biosynthetic arginine decarboxylase Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / NIES-2087 / MED4)
A2BNH3 2.96e-140 426 35 11 636 3 speA Biosynthetic arginine decarboxylase Prochlorococcus marinus (strain AS9601)
A2CDK1 1.7e-138 421 37 11 640 3 speA Biosynthetic arginine decarboxylase Prochlorococcus marinus (strain MIT 9303)
Q7TUJ9 1.64e-135 414 37 10 637 3 speA Biosynthetic arginine decarboxylase Prochlorococcus marinus (strain MIT 9313)
Q7VEG4 3.53e-130 400 34 7 632 3 speA Biosynthetic arginine decarboxylase Prochlorococcus marinus (strain SARG / CCMP1375 / SS120)
O23141 5.59e-120 375 35 15 618 1 ADC2 Arginine decarboxylase 2 Arabidopsis thaliana
O82475 2.81e-119 373 34 17 616 2 ADC1 Arginine decarboxylase Brassica juncea
Q43075 1.49e-118 372 35 14 610 2 None Arginine decarboxylase Pisum sativum
Q9SNN0 8.9e-116 364 36 11 614 1 ADC1 Arginine decarboxylase 1 Oryza sativa subsp. japonica
A0A1S3WYR7 1.63e-115 364 34 14 630 3 ADC1B Arginine decarboxylase 1B, chloroplastic Nicotiana tabacum
Q39827 1.9e-115 363 35 14 609 2 None Arginine decarboxylase Glycine max
A0A1S3YCW2 1.4e-114 362 34 14 632 1 ADC1A Arginine decarboxylase 1A, chloroplastic Nicotiana tabacum
Q9SI64 1.42e-114 361 34 16 609 1 ADC1 Arginine decarboxylase 1, chloroplastic Arabidopsis thaliana
Q96412 2.37e-111 353 35 13 622 2 ADC Arginine decarboxylase Dianthus caryophyllus
P49726 1.78e-105 331 35 11 518 2 None Arginine decarboxylase Solanum lycopersicum
P22220 8.24e-99 317 32 22 648 1 SPE1 Arginine decarboxylase Avena sativa
Q7XRA1 1.52e-90 296 32 15 612 1 ADC2 Arginine decarboxylase 2 Oryza sativa subsp. japonica
O81160 3.61e-83 270 38 12 429 3 SPE2 Arginine decarboxylase (Fragment) Theobroma cacao
Q9PII5 1.97e-16 85 25 11 318 3 lysA Diaminopimelate decarboxylase Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
Q9ZME5 5.79e-15 80 26 13 301 3 lysA Diaminopimelate decarboxylase Helicobacter pylori (strain J99 / ATCC 700824)
B4XMC6 1.46e-13 76 25 13 301 1 lysA Diaminopimelate decarboxylase Helicobacter pylori
P56129 2.75e-13 75 26 12 278 3 lysA Diaminopimelate decarboxylase Helicobacter pylori (strain ATCC 700392 / 26695)
Q9Z661 2.96e-12 72 27 13 309 3 lysA Diaminopimelate decarboxylase Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
O29458 9.67e-11 67 25 11 281 3 lysA Diaminopimelate decarboxylase Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q8RQM6 1.44e-09 64 28 10 243 3 lysA Diaminopimelate decarboxylase Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
P09890 4.04e-09 62 28 10 243 1 lysA Diaminopimelate decarboxylase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q58497 6.26e-09 62 25 10 277 1 lysA Diaminopimelate decarboxylase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P44316 1.03e-08 61 23 11 294 3 lysA Diaminopimelate decarboxylase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9KVL7 1.17e-08 61 26 11 297 1 lysA Diaminopimelate decarboxylase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P19572 5.84e-08 59 24 11 303 3 lysA Diaminopimelate decarboxylase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O27390 3.88e-07 56 25 12 280 3 lysA Diaminopimelate decarboxylase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Q2L4H3 4.31e-07 56 25 10 248 1 btrK L-glutamyl-[BtrI acyl-carrier protein] decarboxylase Niallia circulans
Q8A800 5.44e-07 55 22 12 332 3 lysA Diaminopimelate decarboxylase Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)
O69203 9.73e-07 55 33 6 151 3 lysA Diaminopimelate decarboxylase Actinosynnema pretiosum subsp. auranticum
O67262 1.07e-06 55 29 3 114 1 lysA Diaminopimelate decarboxylase Aquifex aeolicus (strain VF5)
Q55484 1.42e-06 55 22 10 336 3 lysA Diaminopimelate decarboxylase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O05321 2.54e-06 53 24 11 299 3 lysA Diaminopimelate decarboxylase Pseudomonas fluorescens
P23630 2.6e-06 53 27 15 282 3 lysA Diaminopimelate decarboxylase Bacillus subtilis (strain 168)
Q6ZG77 3.43e-06 53 23 5 259 2 LYSA Probable diaminopimelate decarboxylase, chloroplastic Oryza sativa subsp. japonica
Q5HG20 5.2e-06 53 26 16 297 3 lysA Diaminopimelate decarboxylase Staphylococcus aureus (strain COL)
Q2G1M6 1.08e-05 52 21 7 291 1 sbnH 2-[(L-alanin-3-ylcarbamoyl)methyl]-2-hydroxybutanedioate decarboxylase Staphylococcus aureus (strain NCTC 8325 / PS 47)
P07805 2.67e-05 50 25 13 259 1 None Ornithine decarboxylase Trypanosoma brucei brucei
Q94A94 3.02e-05 50 23 10 313 1 LYSA2 Diaminopimelate decarboxylase 2, chloroplastic Arabidopsis thaliana
Q9JWA6 8.46e-05 48 22 10 298 3 lysA Diaminopimelate decarboxylase Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
P9WIU7 0.00011 48 25 12 296 1 lysA Diaminopimelate decarboxylase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WIU6 0.00011 48 25 12 296 3 lysA Diaminopimelate decarboxylase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P0A5M5 0.00011 48 25 12 296 3 lysA Diaminopimelate decarboxylase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q949X7 0.000373 47 22 9 297 1 LYSA1 Diaminopimelate decarboxylase 1, chloroplastic Arabidopsis thaliana
Q9HK20 0.000403 47 25 11 228 3 lysA Diaminopimelate decarboxylase Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
O50657 0.000547 46 22 10 286 1 ldc Lysine/ornithine decarboxylase Selenomonas ruminantium
Q9JXM2 0.000579 46 22 11 302 3 lysA Diaminopimelate decarboxylase Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08960
Feature type CDS
Gene speA
Product biosynthetic arginine decarboxylase
Location 1860163 - 1862067 (strand: -1)
Length 1905 (nucleotides) / 634 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_879
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain
PF17810 Arginine decarboxylase helical bundle domain
PF17944 Arginine decarboxylase C-terminal helical extension

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1166 Amino acid transport and metabolism (E) E Arginine decarboxylase (spermidine biosynthesis)

Protein Sequence

MNDNIALKMQQTYNIEYWGGSYYGVNDLGHVTVCPNPDMPQAKIDLAELVSKVQKEREHIRLPALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQQRRVIETLVNAGEPLGLEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALMGEKLGHKMYLVIEKMSEIAVVLQEAKSLDVVPRLGVRARLASQGSGKWQASGGEKSKFGLAATQVLQLIEMLRQADSLDSLQLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNEYANNVIWAIGDACEEHGLPHPTVITESGRALTAHHTVLVSNVIGVERNEFPLAPPPAEDAPRPVASLWETWEEMQTKGNARSLREWLHDSQLDLHDIHTQYAQGMLSLTERAWAEGLYLNICRRIQQDLDPSNRAHRPIIDELQERMADKFYVNFSLFQSLPDAWGIDQLFPVLPIEGLDKPLDRRAVLLDITCDSDGIIDHYVDGDGVATTMPMPSYDPENPPLLGFFMIGAYQEILGNMHNLFGDTAALDVYVGETGQIRYLESEAGDTVADMLQYVKLDPKILLERFRDQVKVSDLDEAEQQAFTEEFESGLYGYTYLEDE

Flanking regions ( +/- flanking 50bp)

CTTATGTCAGCCATACAGGTAAGTTTCACTCCAGAATCAGGAGATGACCAATGAATGATAATATCGCGCTGAAGATGCAGCAGACTTATAATATTGAGTACTGGGGCGGCAGCTATTATGGTGTTAATGACCTGGGTCATGTCACCGTTTGCCCGAATCCGGATATGCCGCAGGCGAAAATCGACCTGGCAGAGCTGGTCAGTAAAGTACAGAAAGAACGTGAACACATCCGTTTACCGGCACTGTTCTGCTTTCCGCAGATTTTGCAACATCGTCTGCGTTCGATTAATGCCGCATTTAAACGCGCCCGTGAATCCTACGGTTACAAGGGTGATTATTTCCTGGTTTACCCGATTAAGGTAAATCAGCAGCGCCGCGTGATTGAAACCCTGGTAAATGCCGGGGAGCCGCTGGGGCTGGAAGCCGGTTCCAAAGCGGAACTGATGGCGGTACTGGCTCACGCCGGAATGACCCGCAGCGTGATTGTCTGTAACGGCTATAAAGACCGTGAATATATCCGCCTGGCACTGATGGGTGAGAAACTCGGTCATAAAATGTATCTCGTTATTGAGAAAATGTCAGAAATAGCCGTGGTGTTGCAGGAGGCGAAAAGCCTCGATGTTGTGCCGCGCCTGGGTGTGCGCGCACGTCTGGCATCTCAGGGCTCCGGTAAATGGCAGGCGAGCGGCGGTGAAAAATCCAAGTTCGGTCTGGCAGCGACTCAGGTGCTGCAACTGATCGAAATGCTCCGTCAGGCAGACAGCCTGGACAGCCTGCAATTGCTGCATTTCCACCTTGGTTCACAGATGGCGAATATCCGTGATATCGCGACAGGCGTGCGTGAATCCGCCCGTTTTTATGTGGAACTGCATAAATTAGGGGTCAATATTCAGTGCTTTGATGTCGGCGGTGGTCTGGGTGTGGATTATGAAGGCACCCGCTCGCAGTCTGACTGCTCAGTCAATTACGGGCTGAATGAATATGCCAATAATGTTATCTGGGCAATTGGTGATGCCTGCGAAGAGCACGGATTACCGCATCCGACGGTGATTACCGAATCAGGGCGCGCCCTGACCGCGCATCACACTGTATTGGTGTCCAATGTTATCGGGGTGGAACGCAATGAGTTTCCGCTTGCGCCGCCACCGGCAGAGGATGCACCGCGTCCGGTTGCCAGCCTGTGGGAAACCTGGGAAGAGATGCAGACCAAAGGCAATGCCCGCTCACTGCGTGAATGGCTGCATGACAGCCAGCTTGACCTGCATGATATCCACACCCAATACGCGCAGGGAATGCTTTCCCTGACAGAACGCGCCTGGGCGGAAGGGTTATACCTGAATATCTGTCGCCGCATCCAGCAGGATCTCGACCCGAGCAACCGTGCGCACCGCCCGATTATCGATGAACTTCAGGAGCGCATGGCAGATAAATTCTATGTGAATTTCTCGCTGTTTCAGTCGCTGCCGGATGCGTGGGGAATCGATCAGTTATTTCCTGTGCTGCCGATTGAAGGACTGGATAAGCCATTGGATCGCCGTGCGGTACTGCTGGATATTACCTGTGATTCAGACGGTATTATTGATCATTATGTGGATGGTGATGGTGTCGCAACAACCATGCCGATGCCGTCTTATGACCCGGAAAATCCCCCGCTGCTGGGCTTCTTTATGATCGGTGCTTACCAGGAAATTCTCGGCAATATGCATAACCTGTTTGGTGATACCGCCGCGCTGGATGTGTATGTCGGTGAAACCGGGCAGATCCGCTATCTGGAGAGTGAAGCGGGTGATACGGTCGCCGATATGCTTCAGTATGTGAAACTGGATCCGAAGATTTTGCTGGAACGTTTCCGGGATCAGGTGAAAGTCTCTGATCTGGATGAAGCGGAACAGCAGGCCTTTACGGAAGAGTTCGAAAGTGGTCTTTACGGATATACGTATCTGGAAGATGAATAAATCTATTTTTCATTATTATATACCCAACATCATTCAAGATGCAGGAAGGC