Homologs in group_3648

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3 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS08450 F4V73_RS08450 37.9 Morganella psychrotolerans - molecular chaperone
F4V73_RS10275 F4V73_RS10275 32.9 Morganella psychrotolerans - molecular chaperone
PMI_RS12550 PMI_RS12550 30.5 Proteus mirabilis HI4320 - molecular chaperone

Distribution of the homologs in the orthogroup group_3648

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3648

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37923 3.02e-31 117 36 9 232 3 fimC Chaperone protein FimC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P42914 6.66e-31 117 33 9 238 2 yraI Probable fimbrial chaperone YraI Escherichia coli (strain K12)
P75856 4.69e-29 112 31 9 226 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli (strain K12)
Q8X5E4 6.45e-29 112 31 9 226 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli O157:H7
P43661 3.9e-28 109 34 4 176 3 lpfB Chaperone protein LpfB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P31697 7.87e-27 106 31 9 225 1 fimC Chaperone protein FimC Escherichia coli (strain K12)
P69966 1.16e-26 107 32 8 225 3 psaB Chaperone protein PsaB Yersinia pseudotuberculosis serotype I (strain IP32953)
P69965 1.16e-26 107 32 8 225 3 psaB Chaperone protein PsaB Yersinia pestis
P77249 5.82e-26 104 32 9 236 2 sfmC Probable fimbrial chaperone SfmC Escherichia coli (strain K12)
P59590 9.46e-26 103 30 9 225 3 fimC Chaperone protein FimC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P45991 2.51e-25 102 32 9 240 3 hifB Chaperone protein HifB Haemophilus influenzae
P35757 9.35e-25 101 32 9 240 3 hifB Chaperone protein HifB Haemophilus influenzae
Q8X5K6 2.99e-24 99 31 3 182 2 lpfB Probable fimbrial chaperone LpfB Escherichia coli O157:H7
P75749 3.22e-24 99 31 10 236 3 ybgP Uncharacterized fimbrial chaperone YbgP Escherichia coli (strain K12)
P33407 3.69e-24 100 26 8 258 3 myfB Chaperone protein MyfB Yersinia enterocolitica
P62609 5.96e-24 99 33 10 224 1 focC Chaperone protein FocC Escherichia coli
P62610 5.96e-24 99 33 10 224 3 focC Chaperone protein FocC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P53516 2.07e-23 97 29 6 200 3 afaB Chaperone protein AfaB Escherichia coli
P46004 3.3e-23 97 28 7 212 3 aggD Chaperone protein AggD Escherichia coli
P26926 2.08e-22 95 27 7 236 1 caf1M Chaperone protein caf1M Yersinia pestis
P33128 4.36e-22 94 30 12 249 1 yadV Probable fimbrial chaperone YadV Escherichia coli (strain K12)
P33342 1.18e-21 93 30 7 228 2 yehC Probable fimbrial chaperone YehC Escherichia coli (strain K12)
P40876 1.24e-21 92 30 9 239 2 ycbF Uncharacterized fimbrial chaperone YcbF Escherichia coli (strain K12)
P33409 1.42e-21 92 30 9 239 3 fimB Chaperone protein FimB/FhaD Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P15319 1.99e-21 92 28 6 225 1 papD Chaperone protein PapD Escherichia coli
P53520 3.76e-21 92 30 10 233 3 pmfD Chaperone protein PmfD Proteus mirabilis (strain HI4320)
P77616 1.07e-20 90 29 12 238 3 yqiH Uncharacterized fimbrial chaperone YqiH Escherichia coli (strain K12)
P21646 1.11e-20 90 29 8 237 3 mrkB Chaperone protein MrkB Klebsiella pneumoniae
P25402 6.98e-20 88 26 5 224 3 fanE Chaperone protein FanE Escherichia coli
P46738 3.57e-19 86 27 6 200 3 nfaE Chaperone protein NfaE Escherichia coli
P15483 1.64e-16 79 27 8 210 3 None Chaperone protein CS3-1 Escherichia coli
P33387 1.4e-14 73 27 6 187 3 sefB Chaperone protein SefB Salmonella enteritidis
P25401 1.7e-14 73 27 5 193 1 faeE Chaperone protein FaeE Escherichia coli
P77599 3.59e-14 73 26 7 218 2 yfcS Probable fimbrial chaperone YfcS Escherichia coli (strain K12)
Q05433 3.36e-13 70 26 4 185 3 clpE Chaperone protein ClpE Escherichia coli
P53519 1.02e-11 65 26 8 226 3 cssC Chaperone protein CssC Escherichia coli
P53518 1.1e-11 65 27 8 226 3 cssC Chaperone protein CssC Escherichia coli
P42183 1.83e-05 46 31 4 106 3 prsD Chaperone protein PrsD (Fragment) Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS08430
Feature type CDS
Gene -
Product molecular chaperone
Location 1741381 - 1742106 (strand: 1)
Length 726 (nucleotides) / 241 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3648
Orthogroup size 4
N. genomes 2

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Genomic region

Domains

PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain
PF02753 Pili assembly chaperone PapD, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3121 Extracellular structures (W) W P pilus assembly protein, chaperone PapD

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07346 fimbrial chaperone protein Two-component system -

Protein Sequence

MKKITVIHYVIGSLVLLSASASAGIAIDNTRVIFQAADDTAGKSVGITSSSNSLTPYLVKTQILQTPTGDNADTPFLVTPSLFRLEPGSTNQIRIMKKPGELPQNKESVFYLHTIAVPAGEKDNSSQQSHIGGTLQVSTGNVIKLFYRPAGLGMTQQQAMQSLQFSAAGNGLKVTNPSPYYVSLDTLNINGRKVAMSIKNGSTMVAPFASNTFVNAPHQGRAEWKAINDYGATEVFYGQVR

Flanking regions ( +/- flanking 50bp)

AGAGCGGTCTACCGCTCTGCCCTGTTCCTGAGAGTGACACGGAGAGAAATATGAAAAAAATCACTGTAATTCATTATGTTATCGGAAGTTTAGTTTTACTCTCCGCATCAGCCTCTGCCGGGATAGCCATTGATAACACCCGGGTTATTTTTCAGGCAGCTGACGACACCGCAGGAAAAAGTGTCGGGATAACCAGTTCATCAAACTCACTGACACCCTATCTGGTCAAAACGCAGATATTGCAGACACCAACAGGCGACAATGCGGATACCCCGTTTTTAGTAACACCGTCTCTGTTCCGTCTGGAACCGGGATCAACCAACCAAATCCGGATTATGAAAAAACCCGGGGAATTACCGCAAAACAAAGAATCTGTCTTTTATTTGCACACCATCGCTGTACCGGCCGGTGAAAAAGATAACAGCAGTCAGCAGAGTCATATCGGCGGTACGCTACAGGTTTCAACCGGTAATGTTATCAAATTATTTTATCGCCCTGCCGGTCTTGGCATGACGCAACAGCAGGCGATGCAGTCACTGCAATTTTCAGCTGCCGGAAACGGACTGAAAGTCACCAATCCGTCGCCGTATTACGTCTCGCTGGACACTCTGAATATTAATGGGCGTAAAGTTGCGATGAGTATTAAAAACGGCAGCACCATGGTCGCACCATTTGCCAGCAATACCTTCGTCAACGCACCGCATCAGGGACGCGCCGAATGGAAAGCCATCAATGACTACGGCGCAACGGAGGTGTTTTATGGTCAGGTCCGGTAAATATCTGCCGGTGCTGTGTCTGGCGCTGTTCAGTGCATCACTGACCGCCC