Homologs in group_539

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01240 FBDBKF_01240 81.0 Morganella morganii S1 tadA tRNA adenosine(34) deaminase TadA
EHELCC_00305 EHELCC_00305 81.0 Morganella morganii S2 tadA tRNA adenosine(34) deaminase TadA
NLDBIP_03155 NLDBIP_03155 81.0 Morganella morganii S4 tadA tRNA adenosine(34) deaminase TadA
LHKJJB_04670 LHKJJB_04670 81.0 Morganella morganii S3 tadA tRNA adenosine(34) deaminase TadA
HKOGLL_02375 HKOGLL_02375 81.0 Morganella morganii S5 tadA tRNA adenosine(34) deaminase TadA
PMI_RS09290 PMI_RS09290 56.9 Proteus mirabilis HI4320 tadA tRNA adenosine(34) deaminase TadA

Distribution of the homologs in the orthogroup group_539

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_539

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P68397 2.35e-69 210 60 1 163 3 tadA tRNA-specific adenosine deaminase Shigella flexneri
P68398 2.35e-69 210 60 1 163 1 tadA tRNA-specific adenosine deaminase Escherichia coli (strain K12)
Q8FF24 4.11e-69 210 60 1 163 3 tadA tRNA-specific adenosine deaminase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8XA44 4.11e-69 210 60 1 163 3 tadA tRNA-specific adenosine deaminase Escherichia coli O157:H7
Q7CQ08 1.92e-68 208 59 0 165 3 tadA tRNA-specific adenosine deaminase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8XGY4 1.92e-68 208 59 0 165 3 tadA tRNA-specific adenosine deaminase Salmonella typhi
P44931 1.85e-55 175 57 1 154 3 tadA tRNA-specific adenosine deaminase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57343 2.73e-47 154 46 0 153 3 tadA tRNA-specific adenosine deaminase Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q99W51 7.18e-45 148 46 0 153 1 tadA tRNA-specific adenosine deaminase Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q8K9R4 9.22e-45 147 45 1 148 3 tadA tRNA-specific adenosine deaminase Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89AM8 1.23e-44 147 48 0 150 3 tadA tRNA-specific adenosine deaminase Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P21335 1.72e-42 142 47 0 146 1 tadA tRNA-specific adenosine deaminase Bacillus subtilis (strain 168)
Q8P2R7 1.56e-38 132 41 0 148 3 tadA tRNA-specific adenosine deaminase Streptococcus pyogenes serotype M18 (strain MGAS8232)
P0DA21 1.62e-38 132 41 0 151 3 tadA tRNA-specific adenosine deaminase Streptococcus pyogenes serotype M3 (strain SSI-1)
Q5XE14 1.62e-38 132 41 0 151 1 tadA tRNA-specific adenosine deaminase Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
P0DA20 1.62e-38 132 41 0 151 3 tadA tRNA-specific adenosine deaminase Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)
P68999 5.89e-38 131 41 0 151 3 tadA tRNA-specific adenosine deaminase Streptococcus pyogenes serotype M1
Q9S7I0 8.45e-33 126 41 1 165 1 TADA tRNA(adenine(34)) deaminase, chloroplastic Arabidopsis thaliana
A9CK16 1.02e-32 117 43 0 144 1 tadA tRNA-specific adenosine deaminase Agrobacterium fabrum (strain C58 / ATCC 33970)
O67050 1.18e-32 117 42 1 145 1 tadA tRNA-specific adenosine deaminase Aquifex aeolicus (strain VF5)
Q1RGK7 3.99e-28 105 36 2 144 3 tadA tRNA-specific adenosine deaminase Rickettsia bellii (strain RML369-C)
Q92G39 5.77e-27 102 37 1 144 3 tadA tRNA-specific adenosine deaminase Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q68Y02 2.96e-26 100 36 2 145 3 tadA tRNA-specific adenosine deaminase Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q4UJW9 2.18e-25 98 36 2 144 3 tadA tRNA-specific adenosine deaminase Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q9ZCC6 2.38e-25 98 35 2 145 3 tadA tRNA-specific adenosine deaminase Rickettsia prowazekii (strain Madrid E)
C1D1Q9 4.94e-25 103 42 2 146 3 tilS tRNA(Ile)-lysidine synthase Deinococcus deserti (strain DSM 17065 / CIP 109153 / LMG 22923 / VCD115)
O34598 2.84e-22 90 44 2 122 1 guaD Guanine deaminase Bacillus subtilis (strain 168)
Q5E9J7 3.11e-20 86 32 3 154 2 DEADC1 tRNA-specific adenosine deaminase 2 Bos taurus
Q5RIV4 4.94e-20 86 32 4 168 2 adat2 tRNA-specific adenosine deaminase 2 Danio rerio
Q7Z6V5 7.84e-20 85 29 4 168 1 ADAT2 tRNA-specific adenosine deaminase 2 Homo sapiens
Q0P4H0 1.05e-19 84 31 2 149 2 adat2 tRNA-specific adenosine deaminase 2 Xenopus tropicalis
Q6P6J0 6.13e-19 82 29 3 167 1 Adat2 tRNA-specific adenosine deaminase 2 Mus musculus
Q4V7V8 1.89e-18 80 30 3 150 2 adat2 tRNA-specific adenosine deaminase 2 Xenopus laevis
Q94BU8 4.59e-18 80 38 2 118 1 GSDA Guanosine deaminase Arabidopsis thaliana
Q9RV23 1.9e-16 79 44 4 136 3 tilS tRNA(Ile)-lysidine synthase Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
P47058 1.95e-15 74 35 6 160 1 TAD2 tRNA-specific adenosine deaminase subunit TAD2 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q5SI38 4.31e-15 75 42 4 128 3 tilS tRNA(Ile)-lysidine synthase Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Q72IF6 4.84e-15 75 42 4 128 3 tilS tRNA(Ile)-lysidine synthase Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27)
Q6IDB6 1.65e-13 68 30 4 157 1 TAD2 tRNA-specific adenosine deaminase TAD2 Arabidopsis thaliana
Q8GWP5 4.99e-13 69 34 7 161 1 PYRD Riboflavin biosynthesis protein PYRD, chloroplastic Arabidopsis thaliana
P78594 1.04e-12 65 35 3 101 3 FCA1 Cytosine deaminase Candida albicans (strain SC5314 / ATCC MYA-2876)
Q6PAT0 5.08e-12 66 45 1 68 1 Adat3 Probable inactive tRNA-specific adenosine deaminase-like protein 3 Mus musculus
O59834 5.31e-12 63 32 2 108 3 SPCC965.14c Probable cytosine deaminase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q561R2 1.6e-11 64 45 1 68 2 Adat3 Probable inactive tRNA-specific adenosine deaminase-like protein 3 Rattus norvegicus
O66534 2.96e-11 63 35 7 150 3 ribD Riboflavin biosynthesis protein RibD Aquifex aeolicus (strain VF5)
B6TRH4 3.22e-11 63 37 6 123 2 PYRD Riboflavin biosynthesis protein PYRD, chloroplastic Zea mays
P57533 4.11e-11 61 33 7 159 3 ribD1 Diaminohydroxyphosphoribosylamino-pyrimidine deaminase Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q96EY9 4.43e-11 63 48 1 68 1 ADAT3 Probable inactive tRNA-specific adenosine deaminase-like protein 3 Homo sapiens
Q12178 3.7e-10 58 35 4 102 1 FCY1 Cytosine deaminase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P50853 3.83e-10 60 34 7 160 3 ribD Riboflavin biosynthesis protein RibD Actinobacillus pleuropneumoniae
O94642 1.11e-09 59 26 5 177 1 tad2 tRNA-specific adenosine deaminase subunit tad2 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q55158 1.48e-09 59 34 8 159 3 ribD Riboflavin biosynthesis protein RibD Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q8JFW4 5.98e-09 57 44 1 68 2 adat3 Probable inactive tRNA-specific adenosine deaminase-like protein 3 Danio rerio
Q8K9A4 2.56e-08 53 28 6 156 3 ribD1 Diaminohydroxyphosphoribosylamino-pyrimidine deaminase Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q9URQ3 1.85e-07 53 28 3 114 1 TAD3 tRNA-specific adenosine deaminase subunit TAD3 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9P7N4 6.83e-07 51 38 1 63 3 tad3 tRNA-specific adenosine deaminase subunit tad3 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9Z735 9.03e-07 51 28 6 155 3 ribD Riboflavin biosynthesis protein RibD Chlamydia pneumoniae
P70814 3.95e-06 49 31 7 155 3 ribD Riboflavin biosynthesis protein RibD Bacillus amyloliquefaciens
P44326 6.35e-06 48 29 8 157 3 ribD Riboflavin biosynthesis protein RibD Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P30648 1.76e-05 46 33 5 116 3 ZK643.2 Probable deoxycytidylate deaminase Caenorhabditis elegans
F4KH86 2.72e-05 46 37 0 61 1 TAD3 tRNA-specific adenosine deaminase TAD3 Arabidopsis thaliana

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07280
Feature type CDS
Gene tadA
Product tRNA adenosine(34) deaminase TadA
Location 1519605 - 1520129 (strand: -1)
Length 525 (nucleotides) / 174 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_539
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF14437 MafB19-like deaminase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0590 Translation, ribosomal structure and biogenesis (J) J tRNA(Arg) A34 adenosine deaminase TadA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11991 tRNA(adenine34) deaminase [EC:3.5.4.33] - -

Protein Sequence

MDNSTQYNNDEYWMRRALALAKEAGEAGEIPVGAVLVKDNQQVAGGFNQPIRSHDPAAHAEILTLREAGAVLGNYRLIDTTLYVSLEPCMMCAGALIHSRIKRLVFGAAEPKTGAAGSFIDLLTLPRLNHYMDVTGGVLGEECSALLSDFFRRRRAEKKALKRQSAESGSDSAS

Flanking regions ( +/- flanking 50bp)

GTATACGGCGCGATAGTAAGCAACCAGGTGTTAATGTGACTGATAACGTAATTGATAATTCAACACAATATAATAACGACGAATATTGGATGCGCCGGGCGCTCGCACTGGCAAAAGAAGCCGGTGAGGCGGGGGAGATCCCGGTCGGTGCGGTGCTGGTAAAAGATAATCAGCAGGTTGCCGGTGGTTTTAATCAGCCGATCCGCAGTCATGACCCCGCCGCACACGCCGAAATTCTCACACTGCGCGAAGCCGGTGCTGTACTGGGCAATTATCGTCTGATTGATACCACTCTGTATGTCAGCCTTGAGCCGTGCATGATGTGTGCCGGTGCGCTGATCCACAGCCGGATAAAACGGCTGGTCTTTGGCGCAGCGGAGCCGAAAACAGGCGCCGCCGGGTCGTTTATTGATTTACTGACACTTCCGCGCCTTAATCACTATATGGATGTTACCGGCGGGGTGCTGGGGGAAGAGTGCTCTGCATTGCTGAGCGATTTTTTCCGCCGCCGCCGCGCAGAAAAAAAAGCCCTGAAACGTCAGAGTGCAGAGAGTGGCAGCGACAGCGCGTCCTGATCAGGGATTACCGGCAGAGGTCAGCATATTTTTTGCCGGTTCATCTTCAG