Orthogroup:group_539


Homologs in group_539

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01240 FBDBKF_01240 Morganella morganii S1 tadA tRNA adenosine(34) deaminase TadA
EHELCC_00305 EHELCC_00305 Morganella morganii S2 tadA tRNA adenosine(34) deaminase TadA
NLDBIP_03155 NLDBIP_03155 Morganella morganii S4 tadA tRNA adenosine(34) deaminase TadA
LHKJJB_04670 LHKJJB_04670 Morganella morganii S3 tadA tRNA adenosine(34) deaminase TadA
HKOGLL_02375 HKOGLL_02375 Morganella morganii S5 tadA tRNA adenosine(34) deaminase TadA
F4V73_RS07280 F4V73_RS07280 Morganella psychrotolerans tadA tRNA adenosine(34) deaminase TadA
PMI_RS09290 PMI_RS09290 Proteus mirabilis HI4320 tadA tRNA adenosine(34) deaminase TadA

Distribution of group_539 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_539 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_539

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_539.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tadA 7

Product

# Product Occurence
1 tRNA adenosine(34) deaminase TadA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0590 7 J Translation, ribosomal structure and biogenesis (J) tRNA(Arg) A34 adenosine deaminase TadA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11991 7 tRNA(adenine34) deaminase [EC:3.5.4.33] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF14437 7 MafB19-like deaminase

Annotations of the 70 SwissProt hits

Annotation Number of occurrences
ComE operon protein 2 1
Cytosine deaminase 2
Diaminohydroxyphosphoribosylamino-pyrimidine deaminase 3
Guanine deaminase 1
Guanosine deaminase 1
Probable cytosine deaminase 1
Probable deoxycytidylate deaminase 1
Probable inactive tRNA-specific adenosine deaminase-like protein 3 4
Riboflavin biosynthesis protein PYRD, chloroplastic 2
Riboflavin biosynthesis protein RibD 13
tRNA(Ile)-lysidine synthase 4
tRNA(adenine(34)) deaminase, chloroplastic 1
tRNA-specific adenosine deaminase 24
tRNA-specific adenosine deaminase 2 6
tRNA-specific adenosine deaminase TAD2 1
tRNA-specific adenosine deaminase TAD3 1
tRNA-specific adenosine deaminase subunit TAD2 1
tRNA-specific adenosine deaminase subunit TAD3 1
tRNA-specific adenosine deaminase subunit tad2 1
tRNA-specific adenosine deaminase subunit tad3 1

Protein length

Min length 174
Max length 176
Mean length (sd) 175.0 (0.6)
Median length 175.0

Protein length distribution