Homologs in group_3

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24 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14600 FBDBKF_14600 19.9 Morganella morganii S1 fimC P pilus assembly protein, chaperone PapD
EHELCC_15405 EHELCC_15405 19.9 Morganella morganii S2 fimC P pilus assembly protein, chaperone PapD
NLDBIP_15935 NLDBIP_15935 19.9 Morganella morganii S4 fimC P pilus assembly protein, chaperone PapD
LHKJJB_15905 LHKJJB_15905 19.9 Morganella morganii S3 fimC P pilus assembly protein, chaperone PapD
HKOGLL_15025 HKOGLL_15025 19.9 Morganella morganii S5 fimC P pilus assembly protein, chaperone PapD
F4V73_RS01040 F4V73_RS01040 15.5 Morganella psychrotolerans - fimbria/pilus periplasmic chaperone
F4V73_RS01065 F4V73_RS01065 18.7 Morganella psychrotolerans - molecular chaperone
F4V73_RS01680 F4V73_RS01680 13.0 Morganella psychrotolerans - fimbria/pilus periplasmic chaperone
F4V73_RS01855 F4V73_RS01855 14.6 Morganella psychrotolerans - molecular chaperone
F4V73_RS07395 F4V73_RS07395 18.3 Morganella psychrotolerans - molecular chaperone
F4V73_RS08430 F4V73_RS08430 17.7 Morganella psychrotolerans - molecular chaperone
F4V73_RS08450 F4V73_RS08450 18.6 Morganella psychrotolerans - molecular chaperone
F4V73_RS08455 F4V73_RS08455 20.2 Morganella psychrotolerans - molecular chaperone
F4V73_RS09380 F4V73_RS09380 16.7 Morganella psychrotolerans - molecular chaperone
F4V73_RS10245 F4V73_RS10245 17.5 Morganella psychrotolerans - molecular chaperone
F4V73_RS10260 F4V73_RS10260 16.8 Morganella psychrotolerans - molecular chaperone
F4V73_RS10275 F4V73_RS10275 19.6 Morganella psychrotolerans - molecular chaperone
F4V73_RS10895 F4V73_RS10895 15.3 Morganella psychrotolerans - molecular chaperone
F4V73_RS12585 F4V73_RS12585 22.7 Morganella psychrotolerans - molecular chaperone
F4V73_RS13305 F4V73_RS13305 19.0 Morganella psychrotolerans - molecular chaperone
F4V73_RS13315 F4V73_RS13315 19.2 Morganella psychrotolerans - molecular chaperone
F4V73_RS13325 F4V73_RS13325 15.0 Morganella psychrotolerans - molecular chaperone
PMI_RS12530 PMI_RS12530 12.5 Proteus mirabilis HI4320 - molecular chaperone
PMI_RS16665 PMI_RS16665 18.8 Proteus mirabilis HI4320 - molecular chaperone

Distribution of the homologs in the orthogroup group_3

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05995
Feature type CDS
Gene -
Product fimbria/pilus periplasmic chaperone
Location 1271557 - 1272282 (strand: 1)
Length 726 (nucleotides) / 241 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3
Orthogroup size 25
N. genomes 7

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Genomic region

Domains

PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3121 Extracellular structures (W) W P pilus assembly protein, chaperone PapD

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07346 fimbrial chaperone protein Two-component system -

Protein Sequence

MFKSIYKRLGIFLTSALLISLSADAATLQVYPVNIDFSPDEKVKAVYVSNAGSTAINAQIRIFLWEQQNDKNKLSETKNIIVSPPITDIPPGQQQLIRIIIPGLKTSGTEQSYRLVIDELPGNDAPKSDGAVNFLLRYSLPVFINTPEEPLDNHKIDVRINSRTQPATLQVSNNNAQHIKLSDIAIVSNGKEQIINKGLLGYVLANSQMQWPIPGNLSSGQTLKVTINEHSEPQNFVIHSD

Flanking regions ( +/- flanking 50bp)

AACGCAAGGAGTCTTTATGACTCCTTTTCCGTCTTATACCGGCTTATTTTATGTTTAAATCAATATATAAAAGATTAGGGATTTTTCTTACCTCAGCTTTATTGATCTCTTTATCTGCTGATGCGGCAACATTGCAGGTTTATCCGGTCAATATCGATTTTTCACCAGATGAAAAAGTGAAAGCCGTCTATGTTTCTAACGCCGGAAGTACCGCTATTAATGCCCAAATCCGGATATTCCTCTGGGAACAACAAAACGATAAAAATAAACTGTCAGAAACAAAAAATATTATTGTCAGCCCGCCGATTACTGATATTCCGCCAGGACAACAACAGTTAATCCGTATCATTATTCCGGGACTTAAAACATCAGGGACAGAACAATCATACCGCCTTGTAATTGATGAGTTACCGGGAAATGATGCTCCGAAAAGTGATGGTGCGGTCAATTTTTTACTTCGTTATTCATTGCCTGTTTTTATTAATACACCAGAAGAACCTCTTGATAATCATAAAATTGATGTTCGCATTAATAGCCGCACACAACCGGCAACACTTCAGGTTAGCAATAATAATGCCCAACACATCAAATTAAGTGATATTGCGATTGTCAGTAACGGAAAAGAACAAATTATTAATAAAGGATTGCTGGGATATGTGCTGGCAAACAGTCAGATGCAATGGCCTATACCGGGCAACCTGTCATCAGGACAGACACTGAAAGTGACTATTAATGAACATTCAGAACCTCAGAATTTCGTTATTCATTCTGATTAGTACCGCCTTGTATACCACAGGTGGATTTGCGGCACCTGCAACAGAACTGC