Orthogroup:group_20


Homologs in group_20

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19 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08070 FBDBKF_08070 Morganella morganii S1 bisC Anaerobic selenocysteine-containing dehydrogenase
FBDBKF_10450 FBDBKF_10450 Morganella morganii S1 dmsA dimethylsulfoxide reductase subunit A
EHELCC_13900 EHELCC_13900 Morganella morganii S2 bisC Anaerobic selenocysteine-containing dehydrogenase
EHELCC_14785 EHELCC_14785 Morganella morganii S2 dmsA dimethylsulfoxide reductase subunit A
NLDBIP_14345 NLDBIP_14345 Morganella morganii S4 bisC Anaerobic selenocysteine-containing dehydrogenase
NLDBIP_14615 NLDBIP_14615 Morganella morganii S4 dmsA dimethylsulfoxide reductase subunit A
LHKJJB_08505 LHKJJB_08505 Morganella morganii S3 bisC Anaerobic selenocysteine-containing dehydrogenase
LHKJJB_14730 LHKJJB_14730 Morganella morganii S3 dmsA dimethylsulfoxide reductase subunit A
LHKJJB_19940 LHKJJB_19940 Morganella morganii S3 - Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family
HKOGLL_08055 HKOGLL_08055 Morganella morganii S5 bisC Anaerobic selenocysteine-containing dehydrogenase
HKOGLL_13350 HKOGLL_13350 Morganella morganii S5 dmsA dimethylsulfoxide reductase subunit A
F4V73_RS05070 F4V73_RS05070 Morganella psychrotolerans - DMSO/selenate family reductase complex A subunit
F4V73_RS12925 F4V73_RS12925 Morganella psychrotolerans - DMSO/selenate family reductase complex A subunit
F4V73_RS14150 F4V73_RS14150 Morganella psychrotolerans dmsA dimethylsulfoxide reductase subunit A
PMI_RS00825 PMI_RS00825 Proteus mirabilis HI4320 - molybdopterin-dependent oxidoreductase
PMI_RS05810 PMI_RS05810 Proteus mirabilis HI4320 - molybdopterin-dependent oxidoreductase
PMI_RS08345 PMI_RS08345 Proteus mirabilis HI4320 - molybdopterin-dependent oxidoreductase
PMI_RS08900 PMI_RS08900 Proteus mirabilis HI4320 phsA thiosulfate reductase PhsA
PMI_RS14655 PMI_RS14655 Proteus mirabilis HI4320 - molybdopterin-dependent oxidoreductase

Distribution of group_20 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_20 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_20

Orthogroup content: 19 members

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This page summarizes the annotation of all members of the orthologous group group_20.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 bisC 5
2 dmsA 6
3 - 7
4 phsA 1

Product

# Product Occurence
1 Anaerobic selenocysteine-containing dehydrogenase 5
2 dimethylsulfoxide reductase subunit A 6
3 Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 1
4 DMSO/selenate family reductase complex A subunit 2
5 molybdopterin-dependent oxidoreductase 4
6 thiosulfate reductase PhsA 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0243 19 C Energy production and conversion (C) Anaerobic selenocysteine-containing dehydrogenase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07306 16 anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] Sulfur metabolism
Metabolic pathways		 -
K08352 1 thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] Sulfur metabolism
Metabolic pathways
Microbial metabolism in diverse environments		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00384 18 Molybdopterin oxidoreductase
PF01568 19 Molydopterin dinucleotide binding domain
PF04879 17 Molybdopterin oxidoreductase Fe4S4 domain

Annotations of the 231 SwissProt hits

Annotation Number of occurrences
Acetylene hydratase 1
Arsenate respiratory reductase molybdopterin-containing subunit ArrA 2
Arsenite oxidase subunit AioA 2
Assimilatory nitrate reductase 1
Assimilatory nitrate reductase catalytic subunit 1
Biotin sulfoxide reductase 2
Chlorate reductase subunit alpha 1
Dimethyl sulfoxide reductase DmsA 2
Dimethyl sulfoxide/trimethylamine N-oxide reductase 2
Dimethylsulfide dehydrogenase subunit alpha 1
Dopamine dehydroxylase 1
Formate dehydrogenase 2 subunit alpha (cytochrome c-553) 1
Formate dehydrogenase H 1
Formate dehydrogenase major subunit 1
Formate dehydrogenase subunit alpha 3
Formate dehydrogenase, nitrate-inducible, major subunit 1
Formate dehydrogenase-O major subunit 1
Iodate reductase subunit IdrA 2
Menaquinone reductase, molybdopterin-binding-like subunit 1
NADH-quinone oxidoreductase subunit G 1
NADPH-Fe(3+) oxidoreductase subunit alpha 2
Nitrate reductase 5
Nitrate reductase alpha chain 1
Nitrate reductase alpha subunit 2
Perchlorate reductase subunit alpha 1
Periplasmic nitrate reductase 134
Periplasmic nitrate reductase 1 1
Periplasmic nitrate reductase 2 1
Polysulfide reductase chain A 1
Probable dimethyl sulfoxide reductase chain YnfF 1
Probable oxidoreductase YjgC 1
Probable oxidoreductase YoaE 1
Probable oxidoreductase YyaE 1
Protein YdeP 4
Putative dimethyl sulfoxide reductase catalytic subunit A 1
Putative dimethyl sulfoxide reductase chain YnfE 1
Putative formate dehydrogenase MW2229 1
Putative formate dehydrogenase SA2102 1
Putative formate dehydrogenase SAB2186c 1
Putative formate dehydrogenase SACOL2301 1
Putative formate dehydrogenase SAOUHSC_02582 1
Putative formate dehydrogenase SAR2393 1
Putative formate dehydrogenase SAS2201 1
Putative formate dehydrogenase SAUSA300_2258 1
Putative formate dehydrogenase SAV2309 1
Putative formate dehydrogenase SH0748 1
Putative formate dehydrogenase SSP0601 1
Putative formate dehydrogenase YrhE 1
Pyrogallol hydroxytransferase large subunit 1
Respiratory nitrate reductase 1 alpha chain 1
Respiratory nitrate reductase 2 alpha chain 1
Respiratory nitrate reductase alpha chain (Fragments) 1
Respiratory nitrate reductase subunit alpha 1
Selenate reductase subunit alpha 1
Sulfite dehydrogenase subunit A 1
Tetrathionate reductase subunit A 2
Thiosulfate reductase molybdopterin-containing subunit PhsA 1
Trimethylamine-N-oxide reductase 10
Trimethylamine-N-oxide reductase 1 3
Trimethylamine-N-oxide reductase 2 3
Tungsten-containing formylmethanofuran dehydrogenase 2 subunit B 2
Uncharacterized oxidoreductase Elen_0471 1
Uncharacterized oxidoreductase MJ0006 1
Uncharacterized oxidoreductase MT2968 1
Uncharacterized oxidoreductase Mb2924c 1
Uncharacterized oxidoreductase Rv2900c 1

Protein length

Min length 63
Max length 817
Mean length (sd) 765.8 (170.8)
Median length 806.0

Protein length distribution