Homologs in group_661

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02345 FBDBKF_02345 74.7 Morganella morganii S1 ydbH YdbH family protein
EHELCC_02815 EHELCC_02815 74.7 Morganella morganii S2 ydbH YdbH family protein
NLDBIP_00645 NLDBIP_00645 74.7 Morganella morganii S4 ydbH YdbH family protein
LHKJJB_01390 LHKJJB_01390 74.7 Morganella morganii S3 ydbH YdbH family protein
HKOGLL_01430 HKOGLL_01430 74.7 Morganella morganii S5 ydbH YdbH family protein
PMI_RS05705 PMI_RS05705 47.2 Proteus mirabilis HI4320 - YdbH family protein

Distribution of the homologs in the orthogroup group_661

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_661

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P52645 0 655 40 8 844 4 ydbH Uncharacterized protein YdbH Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04725
Feature type CDS
Gene -
Product YdbH family protein
Location 997203 - 999827 (strand: 1)
Length 2625 (nucleotides) / 874 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_661
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF11739 Dicarboxylate transport

Protein Sequence

MKKLLKVLVVLSVLLLMIIPVVWLTLPRWLPVVVKPYLPDGVTLSLSQPELRGRGIQITDWALKGTRCTLAGGHNLSVRYSRAGLWQIDAAGLTGDTECLQTLPASADQPDSEPVNIAALLSQLPSATLTIDNVLITSVPDYQGSLSLTTSGAAGQHVSYQGKNIQTELTVNPDQSVTVSQLNIAAGDDKLSLTGSLTLPGNTATLPEQGQLQAGIVSPSRTLPLVLTFDWQGKQGTLTLRETDSETLLLSLPWAATGETVTITDGEWRWDKAEQPLRGTLSGTLSNWQKTITDMRLTARVSVVTQGKRGKGTVVLQLPETGLSLTGFEIPFELAGQVNSQDMWAAGRLPAVLTGTLSDPVIRISSGALIRARGQLSPTLQVEELRLPLAGTRLSQVGISGPLDAIVTINNPELGRYRFQMKGQAREFLPDNGHWYWQVWGKGNVKPLSADWTFSGAGSWIDNEIRVRRLDTGFKGIRYGMMSMESPALTLLSPVVWQRDAENSDLSGQFQLTTKKIKIDQSYLPSATFVMRMTGRDPHNFSVKGTLSAGKNVGPIQYWTRWDGTRLRGEARWPEQDLRAFQTLIPSDSGITLRNGEFYAQAAFSAAPDQGFVAGGHWVVKQGSMWLKDGEVEGVDFVLPWRLADSRWQLGSKTPVTLRIARVNNLFEVTDIKADLQGYYPYSDRYPLVLSGISLDLLGGQVTMASLSVPQKEAAVIRLDKLSTGPLINTLKVTQFALEGSISGELPFYIDNPQWIVRNGWVENDDPLTLNLDNQFVSSVSENNLSAGTAINWLDYLVMKRVRTDINLTNLGVLTMRSVISGYNPVLDARRVVNLNYNHEENVFQLWRSLSFGSNLEAWLEKTISQQQESNPTE

Flanking regions ( +/- flanking 50bp)

GTTTTCCGGCTGACGCCCGGGAAAACCGCATAATTAACCCGGTAAGGCGCATGAAAAAATTACTGAAAGTGCTGGTGGTATTATCCGTCTTGTTGTTGATGATAATACCGGTTGTCTGGCTGACATTACCCCGCTGGCTCCCCGTAGTCGTAAAGCCGTATCTGCCGGATGGCGTGACGTTGTCACTTTCTCAGCCTGAGCTTCGCGGACGCGGGATACAGATTACAGACTGGGCACTAAAAGGAACCCGCTGCACATTGGCTGGCGGACATAACCTTTCTGTCCGCTACAGCCGCGCCGGGCTTTGGCAGATTGATGCCGCCGGGCTGACCGGTGATACCGAATGTCTACAGACACTGCCTGCATCTGCGGATCAGCCGGACAGTGAACCCGTTAATATCGCTGCACTGCTGTCACAACTGCCTTCTGCCACACTGACAATAGACAATGTCCTTATTACCTCTGTACCTGATTATCAGGGCAGCCTGAGCCTGACCACGTCCGGGGCTGCGGGGCAGCATGTGTCGTATCAGGGAAAGAATATTCAGACCGAACTTACTGTTAACCCTGATCAGAGTGTGACGGTGTCACAATTAAATATAGCTGCCGGTGATGATAAATTGTCTCTCACCGGCAGTCTGACATTGCCGGGCAATACAGCAACACTACCGGAACAGGGGCAATTGCAGGCGGGTATTGTCAGCCCGTCCCGGACACTACCGCTGGTACTGACATTTGACTGGCAGGGAAAGCAGGGAACGCTGACTCTGCGCGAAACAGACAGCGAAACGCTGTTACTGAGCCTTCCCTGGGCGGCTACAGGGGAAACCGTCACAATCACGGATGGAGAATGGCGCTGGGATAAAGCAGAACAACCTTTGCGGGGAACATTGAGTGGAACCCTGAGTAACTGGCAGAAAACAATAACGGATATGCGCCTTACTGCGCGGGTTTCTGTGGTCACACAGGGAAAGCGCGGCAAAGGCACCGTTGTATTGCAATTACCGGAGACCGGGCTGTCACTGACCGGGTTTGAGATCCCGTTTGAGCTTGCCGGTCAGGTCAACAGTCAGGATATGTGGGCGGCGGGACGGCTTCCGGCAGTATTGACCGGCACGCTGTCCGATCCGGTGATACGCATCAGCTCCGGTGCCCTGATCCGCGCCCGCGGGCAGCTCAGTCCGACATTGCAGGTGGAAGAACTGCGCCTGCCGCTGGCGGGAACACGGCTTTCGCAGGTGGGAATTTCCGGTCCGCTGGATGCGATTGTGACCATCAATAACCCTGAACTGGGACGCTACCGTTTTCAGATGAAAGGTCAGGCGCGGGAATTTTTACCTGATAACGGACACTGGTACTGGCAGGTCTGGGGCAAAGGCAATGTCAAACCGCTGAGTGCGGACTGGACATTTTCCGGTGCCGGATCCTGGATAGATAATGAAATCAGGGTAAGGCGGCTGGATACGGGGTTTAAGGGGATCCGTTACGGCATGATGTCGATGGAGTCCCCCGCGCTGACACTATTGTCGCCGGTTGTCTGGCAGCGTGACGCAGAGAACTCCGACCTGAGCGGGCAATTTCAGCTGACGACAAAAAAAATCAAAATTGACCAGAGCTATCTGCCATCCGCCACTTTTGTGATGCGGATGACCGGGCGTGATCCGCATAATTTTTCTGTCAAAGGTACATTGTCAGCCGGAAAAAATGTCGGGCCGATACAGTATTGGACCCGCTGGGACGGCACCCGCCTGCGGGGGGAAGCACGCTGGCCGGAGCAGGATCTGCGTGCCTTTCAGACACTCATTCCGTCTGATTCAGGGATAACACTGCGCAACGGGGAATTTTATGCGCAGGCGGCATTCTCTGCCGCGCCGGATCAGGGATTTGTCGCCGGTGGTCACTGGGTGGTAAAACAAGGCAGCATGTGGCTGAAAGACGGTGAAGTTGAAGGTGTGGATTTTGTACTGCCGTGGCGTCTGGCTGACAGCCGCTGGCAGCTCGGCAGCAAAACACCGGTCACACTGCGTATTGCGCGGGTGAATAATTTATTTGAAGTCACCGATATTAAAGCAGATTTACAGGGCTATTATCCGTACAGTGATCGTTATCCGCTGGTGCTGTCAGGTATCAGTCTGGATTTACTGGGCGGACAGGTGACGATGGCATCATTATCTGTGCCGCAGAAAGAGGCCGCCGTGATACGCCTGGATAAACTGTCCACCGGACCGCTGATTAATACGCTCAAGGTGACACAGTTTGCTCTGGAAGGCAGTATCAGCGGCGAACTACCATTTTATATTGATAACCCGCAGTGGATTGTCCGTAACGGCTGGGTTGAGAATGATGACCCGCTGACATTGAATCTGGATAATCAGTTTGTCTCGTCAGTCAGTGAGAATAACCTCTCAGCAGGCACGGCTATCAATTGGCTGGATTATCTGGTGATGAAACGGGTGCGTACCGATATTAACCTGACAAATTTAGGAGTACTGACCATGCGTTCGGTTATCTCCGGCTACAATCCGGTGCTGGACGCCCGGCGTGTGGTGAATCTTAATTACAATCATGAAGAAAATGTGTTTCAGTTATGGCGCAGCCTGAGTTTTGGCAGCAATCTGGAAGCCTGGCTGGAAAAAACAATTTCACAGCAGCAAGAATCAAATCCGACGGAGTAAGAATGAAAAACTGGATGGCAGGGGCGATATTGCCGTTAATGATTATATCA