Homologs in group_1018

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05685 FBDBKF_05685 95.8 Morganella morganii S1 slyA transcriptional regulator SlyA
EHELCC_11905 EHELCC_11905 95.8 Morganella morganii S2 slyA transcriptional regulator SlyA
NLDBIP_12245 NLDBIP_12245 95.8 Morganella morganii S4 slyA transcriptional regulator SlyA
LHKJJB_12105 LHKJJB_12105 95.8 Morganella morganii S3 slyA transcriptional regulator SlyA
HKOGLL_10720 HKOGLL_10720 95.8 Morganella morganii S5 slyA transcriptional regulator SlyA
PMI_RS06715 PMI_RS06715 78.2 Proteus mirabilis HI4320 slyA transcriptional regulator SlyA

Distribution of the homologs in the orthogroup group_1018

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1018

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8KM02 3.9e-77 228 79 0 143 3 slyA Transcriptional regulator SlyA Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
B1JJ73 6.53e-76 225 75 0 143 1 slyA Transcriptional regulator SlyA Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
P69989 6.53e-76 225 75 0 143 2 slyA Transcriptional regulator SlyA Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TIR6 6.53e-76 225 75 0 143 3 slyA Transcriptional regulator SlyA Yersinia pestis (strain Pestoides F)
Q1CIM0 6.53e-76 225 75 0 143 3 slyA Transcriptional regulator SlyA Yersinia pestis bv. Antiqua (strain Nepal516)
A9QZA1 6.53e-76 225 75 0 143 3 slyA Transcriptional regulator SlyA Yersinia pestis bv. Antiqua (strain Angola)
P69988 6.53e-76 225 75 0 143 3 slyA Transcriptional regulator SlyA Yersinia pestis
A7FHL4 6.53e-76 225 75 0 143 3 slyA Transcriptional regulator SlyA Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q9S3W0 1.79e-74 221 75 0 143 3 slyA Transcriptional regulator SlyA Yersinia enterocolitica
A1JNY1 1.79e-74 221 75 0 143 3 slyA Transcriptional regulator SlyA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q1C786 1.98e-74 221 74 0 143 3 slyA Transcriptional regulator SlyA Yersinia pestis bv. Antiqua (strain Antiqua)
Q2NT07 3.17e-73 218 72 0 144 3 slyA Transcriptional regulator SlyA Sodalis glossinidius (strain morsitans)
A8GDX5 6.39e-73 217 74 0 143 3 slyA Transcriptional regulator SlyA Serratia proteamaculans (strain 568)
Q9F6B2 1.54e-71 214 72 0 143 3 slyA Transcriptional regulator SlyA Edwardsiella tarda
Q492T9 4.91e-71 213 72 0 144 3 slyA Transcriptional regulator SlyA Blochmanniella pennsylvanica (strain BPEN)
B1LEP4 1.55e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Escherichia coli (strain SMS-3-5 / SECEC)
B7NB96 1.55e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P0A4U4 1.55e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
B7MVC0 1.55e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Escherichia coli O81 (strain ED1a)
B7NTZ0 1.55e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7M9Z6 1.55e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Escherichia coli O45:K1 (strain S88 / ExPEC)
P0A4U5 1.55e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Escherichia coli O127:H6 (strain E2348/69 / EPEC)
P0A8W4 1.79e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Shigella flexneri
P0A8W2 1.79e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Escherichia coli (strain K12)
A8A0I5 1.79e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Escherichia coli O9:H4 (strain HS)
B1XFV4 1.79e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Escherichia coli (strain K12 / DH10B)
C4ZYA5 1.79e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Escherichia coli (strain K12 / MC4100 / BW2952)
B7M0J9 1.79e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Escherichia coli O8 (strain IAI1)
B5Z476 1.79e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Escherichia coli O157:H7 (strain EC4115 / EHEC)
P0A8W3 1.79e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Escherichia coli O157:H7
B7L5J5 1.79e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Escherichia coli (strain 55989 / EAEC)
A7ZMA4 1.79e-70 211 72 0 144 3 slyA Transcriptional regulator SlyA Escherichia coli O139:H28 (strain E24377A / ETEC)
Q8D2L8 2.99e-70 211 71 0 144 3 slyA Transcriptional regulator SlyA Wigglesworthia glossinidia brevipalpis
P61091 3.45e-70 210 72 0 144 3 slyA Transcriptional regulator SlyA Salmonella typhi
B5BKC5 3.45e-70 210 72 0 144 3 slyA Transcriptional regulator SlyA Salmonella paratyphi A (strain AKU_12601)
C0Q5T8 3.45e-70 210 72 0 144 3 slyA Transcriptional regulator SlyA Salmonella paratyphi C (strain RKS4594)
Q5PH01 3.45e-70 210 72 0 144 3 slyA Transcriptional regulator SlyA Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P61090 3.45e-70 210 72 0 144 3 slyA Transcriptional regulator SlyA Salmonella choleraesuis (strain SC-B67)
C5BE36 4.49e-70 210 72 0 143 3 slyA Transcriptional regulator SlyA Edwardsiella ictaluri (strain 93-146)
Q6D5V7 1.89e-69 208 72 0 141 3 slyA Transcriptional regulator SlyA Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
B2U2E2 2.83e-69 208 71 0 144 3 slyA Transcriptional regulator SlyA Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q9RA96 5.9e-69 207 71 0 141 3 slyA Transcriptional regulator SlyA Serratia sp. (strain ATCC 39006)
Q9RB09 6.88e-69 207 71 0 141 3 slyA Transcriptional regulator SlyA Pectobacterium carotovorum subsp. carotovorum
C6DK30 9.66e-69 207 71 0 141 3 slyA Transcriptional regulator SlyA Pectobacterium carotovorum subsp. carotovorum (strain PC1)
B5XWN4 2.96e-68 205 69 0 144 3 slyA Transcriptional regulator SlyA Klebsiella pneumoniae (strain 342)
P40676 4.06e-68 205 70 0 144 1 slyA Transcriptional regulator SlyA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q7VR54 7.57e-66 199 69 0 143 3 slyA Transcriptional regulator SlyA Blochmanniella floridana
P94578 2.01e-07 50 26 2 111 4 ywoH Uncharacterized HTH-type transcriptional regulator YwoH Bacillus subtilis (strain 168)
P96708 0.000122 43 28 0 90 4 ydgJ Uncharacterized HTH-type transcriptional regulator YdgJ Bacillus subtilis (strain 168)
P0ACR9 0.000203 42 30 4 139 2 mprA Transcriptional repressor MprA Escherichia coli (strain K12)
P0ACS0 0.000203 42 30 4 139 3 mprA Transcriptional repressor MprA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACS1 0.000203 42 30 4 139 3 mprA Transcriptional repressor MprA Escherichia coli O157:H7
P25150 0.000226 42 24 1 114 4 ywaE Uncharacterized HTH-type transcriptional regulator YwaE Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03620
Feature type CDS
Gene slyA
Product transcriptional regulator SlyA
Location 769974 - 770408 (strand: 1)
Length 435 (nucleotides) / 144 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1018
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF12802 MarR family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1846 Transcription (K) K DNA-binding transcriptional regulator, MarR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06075 MarR family transcriptional regulator, transcriptional regulator for hemolysin - -

Protein Sequence

MELTLGSDLARLVRIWRSLIDHRLKPLKLTQTHWITLYNISLLPPDQSQIQLAKAIGIEQPSLVRTLDQLEEKKLITRHICINDRRAKRIKLTEESEPFIREVDAVIEKTRQEILGGITQDELYALADIVRKLENNIVQLHSRN

Flanking regions ( +/- flanking 50bp)

CATTATGGCGTTCACATGCGTCTGTACAGTATTCACATAAGGAGAAATTTGTGGAGTTAACTTTGGGATCAGATTTAGCGAGATTAGTACGGATATGGCGGTCACTTATCGACCACCGGCTCAAGCCGTTAAAATTAACGCAGACACACTGGATAACACTCTACAACATCAGTTTGTTACCCCCCGACCAATCCCAGATCCAGTTAGCAAAAGCGATTGGTATTGAACAACCTTCACTGGTTCGTACGCTGGATCAGTTGGAAGAGAAAAAGTTAATTACGCGCCATATCTGTATTAACGACCGCAGAGCAAAACGGATAAAGCTCACGGAAGAATCTGAACCTTTTATCCGTGAGGTGGATGCTGTAATTGAAAAGACACGTCAGGAGATTCTGGGGGGAATAACACAGGATGAGTTATACGCGCTGGCTGATATTGTCCGCAAACTAGAAAACAATATTGTTCAGTTACACAGCCGCAACTAACCCGGACAAACAAAAAAGGCGAAACAGAGTTGTTTCGCCTTTTGCCGGAT