Orthogroup:group_1018



Homologs in group_1018

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05685 FBDBKF_05685 Morganella morganii S1 slyA transcriptional regulator SlyA
EHELCC_11905 EHELCC_11905 Morganella morganii S2 slyA transcriptional regulator SlyA
NLDBIP_12245 NLDBIP_12245 Morganella morganii S4 slyA transcriptional regulator SlyA
LHKJJB_12105 LHKJJB_12105 Morganella morganii S3 slyA transcriptional regulator SlyA
HKOGLL_10720 HKOGLL_10720 Morganella morganii S5 slyA transcriptional regulator SlyA
F4V73_RS03620 F4V73_RS03620 Morganella psychrotolerans slyA transcriptional regulator SlyA
PMI_RS06715 PMI_RS06715 Proteus mirabilis HI4320 slyA transcriptional regulator SlyA

Distribution of group_1018 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1018 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1018

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1018.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 slyA 7

Product

# Product Occurence
1 transcriptional regulator SlyA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1846 7 K Transcription (K) DNA-binding transcriptional regulator, MarR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06075 7 MarR family transcriptional regulator, transcriptional regulator for hemolysin - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01047 1 MarR family
PF12802 6 MarR family

Annotations of the 56 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional regulator MhqR 1
HTH-type transcriptional regulator PecS 1
Putative transcriptional regulatory protein for hcr operon 1
Transcriptional regulator SlyA 47
Transcriptional repressor MprA 3
Uncharacterized HTH-type transcriptional regulator YdgJ 1
Uncharacterized HTH-type transcriptional regulator YwaE 1
Uncharacterized HTH-type transcriptional regulator YwoH 1

Protein length

Min length 142
Max length 144
Mean length (sd) 143.7 (0.8)
Median length 144.0

Protein length distribution