Homologs in group_295

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07355 FBDBKF_07355 88.1 Morganella morganii S1 yccC Uncharacterized membrane protein YccC
EHELCC_03615 EHELCC_03615 88.1 Morganella morganii S2 yccC Uncharacterized membrane protein YccC
NLDBIP_03615 NLDBIP_03615 88.1 Morganella morganii S4 yccC Uncharacterized membrane protein YccC
LHKJJB_09445 LHKJJB_09445 88.1 Morganella morganii S3 yccC Uncharacterized membrane protein YccC
HKOGLL_09530 HKOGLL_09530 88.1 Morganella morganii S5 yccC Uncharacterized membrane protein YccC
PMI_RS03870 PMI_RS03870 63.3 Proteus mirabilis HI4320 yccS YccS family putative transporter
PMI_RS06110 PMI_RS06110 27.6 Proteus mirabilis HI4320 - FUSC family protein

Distribution of the homologs in the orthogroup group_295

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_295

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75870 0.0 840 58 3 710 1 yccS Inner membrane protein YccS Escherichia coli (strain K12)
P44289 9.76e-157 474 38 7 628 3 HI_1680 Uncharacterized protein HI_1680 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O33369 2.84e-64 223 38 6 331 3 None Uncharacterized protein ORF2 (Fragment) Neisseria gonorrhoeae
P45537 2.02e-20 100 23 13 455 3 yhfK Uncharacterized protein YhfK Escherichia coli (strain K12)
P72831 7.08e-17 89 25 18 503 3 slr1298 Uncharacterized protein slr1298 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O32225 8.37e-05 49 21 19 498 3 yvaC Uncharacterized membrane protein YvaC Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01540
Feature type CDS
Gene yccS
Product YccS family putative transporter
Location 343423 - 345648 (strand: -1)
Length 2226 (nucleotides) / 741 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_295
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF12805 FUSC-like inner membrane protein yccS
PF13515 Fusaric acid resistance protein-like

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1289 Function unknown (S) S Uncharacterized membrane protein YccC

Protein Sequence

MLAAFRGFSRYIYNSHFLYYTRIFIALTGTTLVPWLLHMPAKVTIALTLGMVAAALTDLDDRLVGRLRNLFITLISFFVASASIELLFDHHILFMAGLALSTSGFILLGALGQRYATIAFGALLIAIYTMLGKNLFDDWYQQPLLLLAGAVWYNLLTLTGHLLFPIRPLQDNLSRYYLQLSNYLEAKANLFDPDIEEDYQQTVFELAMANSALTTSMNQAKTTLFSRLKGDRGQRGTRHALHYYFVAQDIHERASSSHIQYQNLSNELRYSDIMFRFQRLMSMQGRACAAVAQAILQRKKYEHNPRFERVFSYLENSLNLLEQQKPGNSSVMALRHLLSNLQGVDSQLKGLSAEQTKLPAEKLQEDARLSNENLQGLRDIWSRFRQNLTPRSALFRHAIRMSVLLCAGYAIIQLFDLNRGYWIMLTSLFVCQPNYSATKRRLMLRITGTLAGILIGLPIMYFVPSYEGQLILMVISGLMFFVFRTSQYAQATIFITLLVLFSFNLLGEGFDIALHRIVDTIIGCGLAWFAVSYIWPDWKYRQLPLVIDRTMQANGRYLEQILRQYYDGKNDGLDYRVARRDAHISDGEFASVVANISSEPSSYRTSHDEAFRLLCLNHTLLSYISGLGAHRTKLTDDTVLRLLNDTIRYAEAALQQGRQGELQIHAIAEALAQRLDKCKCENNSAEQLVAEQIRLLLNLIPDIVMLIRQITEKEQNRQQGTKRRNRQKATTDSTEPGHKSP

Flanking regions ( +/- flanking 50bp)

GTTTACTGCCAAATTCCCGTTAAGGGTATTTCTGACTTATTGAGGTTACTGTGCTTGCAGCGTTTCGCGGCTTCAGCCGTTATATTTATAACAGCCATTTTCTTTACTATACCCGCATATTCATTGCGCTGACAGGCACCACACTGGTGCCGTGGCTGCTGCACATGCCGGCGAAAGTCACTATCGCTCTGACGCTCGGGATGGTTGCAGCCGCCCTGACAGACCTGGATGACCGTCTGGTCGGTCGTCTGCGCAACCTGTTTATCACACTTATCTCCTTTTTTGTCGCTTCTGCATCTATCGAGCTGCTGTTTGATCACCACATTCTTTTTATGGCGGGTCTTGCGCTGTCAACCAGCGGATTTATTCTGCTGGGCGCGCTGGGGCAGCGCTACGCGACTATCGCGTTTGGCGCACTGCTGATCGCCATTTACACTATGCTGGGGAAAAATCTGTTTGATGACTGGTATCAGCAGCCGCTGCTGTTGCTGGCCGGGGCGGTCTGGTACAACCTGCTGACACTGACCGGGCACCTGTTGTTTCCGATACGCCCGTTGCAGGACAATCTCTCACGCTATTACCTGCAACTGTCAAATTATCTGGAAGCCAAAGCGAATCTGTTTGATCCGGATATTGAAGAAGATTATCAGCAGACGGTATTTGAACTGGCGATGGCAAACAGTGCTCTCACCACATCAATGAATCAGGCAAAAACCACGCTGTTCTCACGGCTGAAAGGTGACCGCGGGCAGCGCGGTACCCGCCACGCACTGCACTATTATTTTGTCGCCCAGGATATTCATGAGCGGGCCAGTTCATCCCATATTCAGTATCAGAATTTAAGTAATGAACTGCGTTACAGCGACATAATGTTCCGTTTTCAGCGCCTGATGTCAATGCAGGGGCGGGCTTGTGCTGCCGTTGCACAGGCTATCTTACAGCGGAAAAAATATGAGCATAACCCGCGTTTTGAGCGGGTATTTTCCTATCTGGAAAACTCCCTGAATCTTCTGGAGCAACAAAAGCCCGGTAACAGCAGCGTGATGGCACTGCGCCACCTGCTGAGTAACCTGCAGGGCGTGGACTCTCAGCTTAAAGGCCTCAGTGCGGAACAGACTAAATTACCGGCAGAAAAATTGCAGGAAGATGCGAGGCTTTCCAATGAAAATCTCCAGGGGCTGCGCGATATCTGGTCGCGTTTCCGGCAGAACCTGACCCCGCGCTCCGCGCTGTTCCGCCATGCTATCAGGATGTCTGTATTACTGTGCGCCGGTTACGCCATTATCCAGCTGTTTGATTTAAACCGCGGCTACTGGATTATGCTGACCAGCCTTTTTGTCTGTCAGCCGAACTACAGTGCCACCAAGCGCCGCCTGATGCTGCGGATAACCGGGACACTCGCGGGGATCCTGATCGGCCTGCCAATCATGTACTTTGTACCGTCCTATGAGGGACAGCTAATTCTGATGGTAATTTCCGGGCTGATGTTTTTTGTTTTCCGTACCAGCCAGTATGCTCAGGCGACTATCTTTATTACCCTGCTCGTTCTGTTCAGCTTTAATTTGCTGGGCGAAGGGTTTGATATCGCACTTCACCGTATTGTTGATACCATCATCGGCTGTGGTCTTGCCTGGTTTGCGGTCAGTTATATCTGGCCGGACTGGAAATACCGTCAGCTTCCCCTGGTTATTGACCGCACGATGCAGGCAAACGGTCGTTATCTTGAGCAAATTCTGCGCCAGTACTATGACGGTAAAAATGACGGACTGGATTACCGGGTTGCCCGCCGGGATGCGCACATCAGTGACGGTGAATTTGCCTCGGTTGTGGCGAATATCTCATCTGAACCCAGCAGTTACCGGACATCTCATGATGAAGCGTTCCGCCTGCTTTGCCTGAACCACACACTGCTGAGCTATATTTCCGGTCTGGGCGCACACCGTACAAAACTGACTGATGATACTGTTTTGCGTTTGCTGAATGACACTATCCGTTACGCCGAGGCCGCACTGCAACAGGGTCGTCAGGGCGAATTACAGATCCATGCTATCGCAGAGGCGCTGGCGCAGCGTCTTGATAAATGTAAGTGTGAAAACAACAGTGCAGAGCAATTGGTTGCAGAGCAAATCCGCCTGTTACTCAATTTAATCCCTGATATTGTTATGCTTATCCGCCAGATAACAGAAAAAGAGCAGAACAGACAACAGGGTACAAAAAGGCGGAACAGGCAGAAAGCCACAACTGACAGCACAGAGCCCGGCCATAAGTCACCATAGCCCGCCGGACCCCGGGGACATAACAGATAACCCTGTTCCCCGGGGTATCA