Homologs in group_295

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07355 FBDBKF_07355 63.5 Morganella morganii S1 yccC Uncharacterized membrane protein YccC
EHELCC_03615 EHELCC_03615 63.5 Morganella morganii S2 yccC Uncharacterized membrane protein YccC
NLDBIP_03615 NLDBIP_03615 63.5 Morganella morganii S4 yccC Uncharacterized membrane protein YccC
LHKJJB_09445 LHKJJB_09445 63.5 Morganella morganii S3 yccC Uncharacterized membrane protein YccC
HKOGLL_09530 HKOGLL_09530 63.5 Morganella morganii S5 yccC Uncharacterized membrane protein YccC
F4V73_RS01540 F4V73_RS01540 63.3 Morganella psychrotolerans yccS YccS family putative transporter
PMI_RS06110 PMI_RS06110 27.2 Proteus mirabilis HI4320 - FUSC family protein

Distribution of the homologs in the orthogroup group_295

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_295

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75870 0.0 872 62 1 694 1 yccS Inner membrane protein YccS Escherichia coli (strain K12)
P44289 2.86e-157 475 36 9 715 3 HI_1680 Uncharacterized protein HI_1680 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O33369 5.23e-63 219 37 2 318 3 None Uncharacterized protein ORF2 (Fragment) Neisseria gonorrhoeae
P45537 3.67e-23 108 24 17 559 3 yhfK Uncharacterized protein YhfK Escherichia coli (strain K12)
P72831 6.53e-14 79 23 21 503 3 slr1298 Uncharacterized protein slr1298 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O23086 0.000121 48 23 6 197 3 ALMT10 Aluminum-activated malate transporter 10 Arabidopsis thaliana
Q83IQ8 0.00024 48 22 3 159 3 mdtO Multidrug resistance protein MdtO Shigella flexneri
P32715 0.000245 48 22 3 167 1 mdtO Multidrug resistance protein MdtO Escherichia coli (strain K12)
Q8X5R8 0.000293 48 22 3 160 3 mdtO Multidrug resistance protein MdtO Escherichia coli O157:H7
Q8FAX2 0.000303 48 22 3 160 3 mdtO Multidrug resistance protein MdtO Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
O32225 0.00039 47 24 3 177 3 yvaC Uncharacterized membrane protein YvaC Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03870
Feature type CDS
Gene yccS
Product YccS family putative transporter
Location 876298 - 878472 (strand: -1)
Length 2175 (nucleotides) / 724 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_295
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF12805 FUSC-like inner membrane protein yccS
PF13515 Fusaric acid resistance protein-like

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1289 Function unknown (S) S Uncharacterized membrane protein YccC

Protein Sequence

MFNLFNGARRFIYNSHFLYYIRIIIALTGTTLFPWALGQEPKYTIPLTLGVVAAALTDLDDRLVGRLRNLVITLCCFLLASTSIGLLYPYPILFFCGLAISTWGFILLGALGQRYATIAFGALLIAIYTMLGMPIFPEWHEQPIWLLLGAIWYNLLTLIGHLLFPIRPVQDSLTRYYQQLSAYLEAKAALFDPDIEGDQQQLLYNLALANNQLIEAMSQTKLTLLSRLKGDRGQRSSRFTLHYYFVAQDIHERASSSHIQYQLLSDRLRHSDVLFRFQRLLSMQARACEQVAQSILWHKKYQHNPHFERAITHLENALNNVKNSTSDPQIIAPLYNLLQNLQGIDALLKSISTEQYQISHDQKEETQLSDEGLTGWRDIVLRIKGHLTPKSALFRHAVRMSLVLCIGYVIIQFFDLHRGYWILLTSLFVCQPNYNATRRRLTLRVSGTIIGILIGFPILYFVPSIEGQLVLIVVTGTLFFAFRTVQYAHATLFITLLVLLSFNLLGEGYDVALPRIIDTLIGCAIAWFAVSFIWPDWKFRQLPLLIQKTMTNNCYYLDAILIQYYQGRDNSVNYRIARRNAHSSDGELASLISNMSSEPKSFQTSQEEAFKLLCLNHTLLSYISALGVHRCKIEDEAVLTLLNDTVCYIDSALRRKKPQDNDFIQSHDQLIARVNAQPSSDNARIQLVLTQIRLLLDLLPQIVNCIELIEQTEWQNDKDKLATA

Flanking regions ( +/- flanking 50bp)

CTATATTCTAAGAGGTAATTATCTCCATCTTGTTTATTTAAGGGCTTTTTGTGTTCAATTTGTTTAATGGCGCCCGCCGATTTATCTATAATAGCCACTTTTTATATTATATTCGCATAATAATCGCACTTACGGGAACGACTTTATTTCCATGGGCTTTAGGACAAGAACCAAAATATACTATACCTCTTACATTAGGTGTTGTCGCAGCCGCATTAACTGACTTAGATGATAGGCTTGTGGGCCGCTTAAGAAACCTTGTGATCACCTTATGTTGTTTCTTATTAGCATCAACATCTATCGGATTACTCTACCCTTACCCTATTTTATTCTTTTGTGGTCTTGCTATCTCCACTTGGGGGTTTATTTTATTAGGCGCCTTGGGTCAGCGTTATGCTACCATCGCCTTTGGTGCGCTATTAATCGCTATTTATACCATGTTAGGTATGCCGATTTTCCCAGAATGGCATGAACAACCTATTTGGCTCCTTTTAGGCGCAATTTGGTATAATTTGCTTACCTTAATTGGTCACCTACTTTTCCCTATTCGTCCCGTTCAAGATAGCCTTACGCGTTATTATCAGCAGCTTTCCGCTTATCTAGAAGCCAAGGCCGCATTATTTGATCCCGATATTGAAGGTGATCAACAGCAATTACTGTATAACTTGGCATTGGCTAATAATCAGTTAATTGAGGCAATGAGCCAAACTAAACTAACATTACTAAGCCGTTTAAAAGGTGATAGGGGCCAGCGTAGCAGTCGTTTCACATTGCATTATTACTTTGTGGCTCAAGATATTCATGAACGGGCCAGCTCTTCTCATATTCAATATCAATTACTGAGTGATAGATTACGCCACAGTGATGTCCTTTTCCGCTTTCAGCGCTTACTGTCAATGCAAGCAAGAGCCTGCGAACAAGTCGCTCAATCTATTCTTTGGCATAAAAAGTACCAACATAATCCTCATTTTGAACGTGCAATCACTCATTTAGAAAATGCACTTAATAATGTAAAAAACAGTACTTCTGATCCACAAATTATTGCGCCACTCTATAATTTATTACAAAACTTACAGGGCATCGATGCTTTATTAAAAAGTATTAGTACAGAGCAATATCAAATCTCTCATGACCAAAAAGAAGAAACTCAGTTATCTGATGAAGGGCTTACTGGGTGGCGAGATATCGTGCTAAGAATAAAGGGTCACTTAACACCAAAATCAGCCCTATTTAGACATGCGGTACGAATGTCACTTGTCTTATGTATAGGTTATGTGATCATCCAGTTTTTTGATTTGCATCGAGGATACTGGATTTTATTAACCAGTTTGTTTGTCTGTCAGCCTAACTATAATGCGACACGTAGACGATTAACATTACGGGTCAGTGGCACTATTATTGGTATTTTAATTGGTTTCCCTATTCTCTATTTTGTGCCTTCCATCGAAGGTCAATTAGTGCTTATTGTTGTGACAGGTACGCTCTTTTTTGCTTTCCGAACCGTACAATACGCTCATGCCACTTTGTTTATTACCCTACTCGTTTTATTGAGTTTTAATTTATTAGGTGAAGGCTATGATGTCGCACTACCGCGGATCATTGATACGTTAATTGGATGTGCCATTGCCTGGTTCGCAGTCAGTTTTATTTGGCCGGATTGGAAGTTCCGTCAGTTGCCATTGCTCATCCAAAAAACCATGACCAATAACTGCTACTATCTTGATGCGATCCTCATTCAGTATTATCAAGGAAGAGATAATAGCGTTAATTATCGTATTGCACGCCGTAATGCACATAGCAGTGATGGTGAGTTAGCATCTTTAATTTCTAATATGTCATCAGAGCCTAAAAGCTTTCAAACCTCTCAAGAAGAAGCATTTAAATTACTGTGTTTAAATCATACTTTACTGAGCTATATTTCAGCGTTAGGTGTTCATCGTTGCAAAATTGAAGATGAAGCGGTACTCACCCTGCTTAATGATACTGTCTGTTATATTGATTCAGCGTTGAGACGTAAAAAACCACAAGATAATGATTTTATACAATCTCACGATCAACTTATCGCACGTGTTAATGCACAACCAAGTTCAGATAACGCCCGTATTCAATTAGTGTTAACGCAAATACGCTTGTTACTGGATTTATTGCCACAAATTGTCAATTGCATTGAGCTAATTGAGCAAACAGAATGGCAAAACGATAAAGATAAATTAGCTACAGCTTGATGGATAAAAAGTTATTTTCTCTAATTTCTATTAGAACCTTAGAGAAAATA