Orthogroup:group_268


Homologs in group_268

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05245 FBDBKF_05245 Morganella morganii S1 tonB Protein TonB
EHELCC_12345 EHELCC_12345 Morganella morganii S2 tonB Protein TonB
NLDBIP_12685 NLDBIP_12685 Morganella morganii S4 tonB Protein TonB
LHKJJB_12545 LHKJJB_12545 Morganella morganii S3 tonB Protein TonB
HKOGLL_11160 HKOGLL_11160 Morganella morganii S5 tonB Protein TonB
F4V73_RS05700 F4V73_RS05700 Morganella psychrotolerans - TonB family protein
PMI_RS06540 PMI_RS06540 Proteus mirabilis HI4320 tonB TonB system transport protein TonB
PMI_RS11845 PMI_RS11845 Proteus mirabilis HI4320 - TonB family protein

Distribution of group_268 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_268 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_268

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_268.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tonB 6
2 - 2

Product

# Product Occurence
1 Protein TonB 5
2 TonB family protein 2
3 TonB system transport protein TonB 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0810 8 M Cell wall/membrane/envelope biogenesis (M) Periplasmic protein TonB, links inner and outer membranes

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03832 8 periplasmic protein TonB - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03544 8 Gram-negative bacterial TonB protein C-terminal
PF16031 5 TonB polyproline region

Annotations of the 9 SwissProt hits

Annotation Number of occurrences
Protein TonB 9

Protein length

Min length 135
Max length 246
Mean length (sd) 230.8 (38.8)
Median length 246.0

Protein length distribution