Homologs in group_1542

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09995 FBDBKF_09995 81.4 Morganella morganii S1 trxA Thiol-disulfide isomerase or thioredoxin
EHELCC_04795 EHELCC_04795 81.4 Morganella morganii S2 trxA Thiol-disulfide isomerase or thioredoxin
NLDBIP_04795 NLDBIP_04795 81.4 Morganella morganii S4 trxA Thiol-disulfide isomerase or thioredoxin
LHKJJB_13835 LHKJJB_13835 81.4 Morganella morganii S3 trxA Thiol-disulfide isomerase or thioredoxin
HKOGLL_12700 HKOGLL_12700 81.4 Morganella morganii S5 trxA Thiol-disulfide isomerase or thioredoxin
PMI_RS02175 PMI_RS02175 58.2 Proteus mirabilis HI4320 - protein disulfide oxidoreductase

Distribution of the homologs in the orthogroup group_1542

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1542

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P43787 6.01e-38 130 38 2 166 3 HI_1115 Thioredoxin-like protein HI_1115 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O31699 1.08e-07 52 27 4 123 1 ykuV Thiol-disulfide oxidoreductase YkuV Bacillus subtilis (strain 168)
P52236 2.37e-07 51 31 4 115 3 ccmG Thiol:disulfide interchange protein DsbE homolog Paracoccus denitrificans (strain Pd 1222)
P33791 3e-07 49 27 1 100 3 trxA Thioredoxin (Fragment) Kitasatospora aureofaciens
P80579 4.23e-07 49 26 2 122 1 trxA Thioredoxin Alicyclobacillus acidocaldarius subsp. acidocaldarius
P9WG65 2.71e-06 48 32 1 82 1 mpt53 Soluble secreted antigen MPT53 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WG64 2.71e-06 48 32 1 82 3 mpt53 Soluble secreted antigen MPT53 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P0A619 2.71e-06 48 32 1 82 3 mpt53 Soluble secreted antigen MPT53 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P20857 5.54e-06 46 29 4 121 1 trxB Thioredoxin 2 Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P46843 9.77e-06 48 28 2 107 3 trxB/A Bifunctional thioredoxin reductase/thioredoxin Mycobacterium leprae (strain TN)
Q05739 1.03e-05 45 27 1 104 1 trxA Thioredoxin Streptomyces clavuligerus
O30974 1.17e-05 45 28 3 125 1 trxA Thioredoxin Mycolicibacterium smegmatis
P9WG67 1.52e-05 45 26 3 127 1 trxA Thioredoxin Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WG66 1.52e-05 45 26 3 127 3 trxA Thioredoxin Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P0A617 1.52e-05 45 26 3 127 3 trxA Thioredoxin Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P21195 1.63e-05 47 32 3 100 2 P4HB Protein disulfide-isomerase Oryctolagus cuniculus
P12243 2.1e-05 44 27 2 103 3 trxA Thioredoxin 1 Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P00275 2.9e-05 44 25 1 103 1 None Thioredoxin C-1 Corynebacterium nephridii
P0A4L2 3.1e-05 44 26 2 118 1 trxA Thioredoxin 1 Nostoc sp. (strain ATCC 29151 / PCC 7119)
P0A4L1 3.1e-05 44 26 2 118 3 trxA Thioredoxin 1 Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P50254 4.09e-05 43 25 2 118 3 trxA Thioredoxin Neopyropia yezoensis
P52231 4.77e-05 43 26 1 109 1 trxA Thioredoxin Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P09102 7.93e-05 45 35 1 62 1 P4HB Protein disulfide-isomerase Gallus gallus
Q4UNK3 8.15e-05 43 26 2 104 3 trxA Thioredoxin Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
P36893 0.000118 43 29 5 124 3 helX Thiol:disulfide interchange protein HelX Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P50413 0.000118 42 30 1 95 3 TXN Thioredoxin Ovis aries
Q6H7E4 0.00012 43 29 2 89 2 Os02g0639900 Thioredoxin M1, chloroplastic Oryza sativa subsp. japonica
Q7X8R5 0.000124 43 30 2 89 2 Os04g0530600 Thioredoxin M2, chloroplastic Oryza sativa subsp. japonica
P52233 0.000125 42 28 2 103 3 trxA Thioredoxin Acidithiobacillus ferridurans
O22022 0.000141 42 25 2 104 3 trxA Thioredoxin Cyanidioschyzon merolae (strain NIES-3377 / 10D)
P05307 0.000159 44 31 3 99 1 P4HB Protein disulfide-isomerase Bos taurus
Q68Y00 0.00016 42 26 2 104 3 trxA Thioredoxin Rickettsia typhi (strain ATCC VR-144 / Wilmington)
P14949 0.000193 42 24 2 116 1 trxA Thioredoxin Bacillus subtilis (strain 168)
P37395 0.000195 42 25 1 103 3 trxA Thioredoxin Cyanidium caldarium
Q99757 0.000202 43 30 0 63 1 TXN2 Thioredoxin, mitochondrial Homo sapiens
Q5R5B6 0.000213 43 31 3 99 2 P4HB Protein disulfide-isomerase Pongo abelii
P07237 0.000213 43 31 3 99 1 P4HB Protein disulfide-isomerase Homo sapiens
Q2HWU2 0.000214 43 31 3 99 2 P4HB Protein disulfide-isomerase Macaca fuscata fuscata
Q73B22 0.000219 43 24 7 162 3 resA Thiol-disulfide oxidoreductase ResA Bacillus cereus (strain ATCC 10987 / NRS 248)
P51225 0.000228 42 24 2 118 3 trxA Thioredoxin Porphyra purpurea
P52230 0.000231 42 28 4 123 1 trxA Thioredoxin 1 Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q8CXF3 0.000233 43 26 5 124 3 resA Thiol-disulfide oxidoreductase ResA Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
P08628 0.000278 41 28 2 95 1 TXN Thioredoxin Oryctolagus cuniculus
Q9ZEE0 0.000289 41 25 2 104 1 trxA Thioredoxin Rickettsia prowazekii (strain Madrid E)
Q92JR5 0.000327 41 26 2 104 3 trxA Thioredoxin Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q96419 0.000354 41 25 2 127 3 None Thioredoxin H-type Fagopyrum esculentum
G4NFB7 0.00037 42 27 3 112 1 TRX2 Thioredoxin-2 Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
P73263 0.000373 41 28 2 92 1 slr1139 Thioredoxin-like protein slr1139 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P09103 0.000376 43 32 3 99 1 P4hb Protein disulfide-isomerase Mus musculus
Q8L7S9 0.000389 42 22 2 89 2 At1g43560 Thioredoxin Y2, chloroplastic Arabidopsis thaliana
Q1RQJ1 0.000398 41 26 2 89 1 None Thioredoxin Asp f 28 Aspergillus fumigatus
Q6HL81 0.000445 42 25 5 124 3 resA Thiol-disulfide oxidoreductase ResA Bacillus thuringiensis subsp. konkukian (strain 97-27)
O81332 0.000449 42 25 2 99 2 None Thioredoxin F-type, chloroplastic Mesembryanthemum crystallinum
P82460 0.000457 41 29 1 95 1 TXN Thioredoxin Sus scrofa
O97508 0.000457 41 29 1 95 3 TXN Thioredoxin Equus caballus
Q41864 0.000523 42 27 1 103 2 TRM1 Thioredoxin M-type, chloroplastic Zea mays
O97680 0.000527 40 29 1 95 3 TXN Thioredoxin Bos taurus
O94504 0.000541 41 26 1 97 1 trx2 Thioredoxin-2, mitochondrial Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9XGS0 0.000545 42 29 1 89 1 None Thioredoxin M-type, chloroplastic Brassica napus
P50338 0.00062 40 25 3 109 3 trxA Thioredoxin Griffithsia pacifica
Q9SEU6 0.000634 42 26 1 89 2 At3g15360 Thioredoxin M4, chloroplastic Arabidopsis thaliana
P66928 0.000781 40 31 3 100 1 trxA Thioredoxin Helicobacter pylori (strain ATCC 700392 / 26695)
P66929 0.000781 40 31 3 100 3 trxA Thioredoxin Helicobacter pylori (strain J99 / ATCC 700824)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00340
Feature type CDS
Gene -
Product protein disulfide oxidoreductase
Location 78944 - 79447 (strand: 1)
Length 504 (nucleotides) / 167 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1542
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF08534 Redoxin

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0526 Posttranslational modification, protein turnover, chaperones (O) O Thiol-disulfide isomerase or thioredoxin

Protein Sequence

MKLLRRWGKEFLLLLVLLFIASQAMDYWRKPDTPDLQSIAALTLTDGTQVSIAQLSAEKPLLVYFQASWCGICKLTSPSVSELSASGYNVVSVAIRSGDDARLAKGMAVKGYNFPVINDPDGKISQQWGVNVTPTFVIYDKGEMVSYTSGWTSKPGLLLRLWRAEYL

Flanking regions ( +/- flanking 50bp)

GATGCACAGTTAGATGCCGTCATTAAAGAAGAACTGGCTAAGGTCAAATAATGAAATTACTGCGCAGATGGGGAAAGGAATTTCTCCTGCTGCTGGTACTTTTATTTATTGCGTCACAGGCGATGGATTACTGGCGCAAGCCGGACACCCCGGATTTACAGAGTATTGCCGCGCTGACACTGACAGATGGCACGCAGGTATCAATTGCACAGCTGAGTGCAGAAAAGCCGCTTCTGGTCTATTTCCAGGCATCCTGGTGCGGGATCTGCAAACTGACATCACCGTCTGTCAGTGAATTATCGGCATCCGGTTACAATGTGGTATCGGTGGCTATCCGCTCGGGTGATGATGCCCGTCTGGCAAAGGGAATGGCGGTAAAAGGCTATAATTTCCCGGTGATAAACGACCCTGACGGTAAAATATCACAGCAATGGGGCGTGAATGTCACCCCGACCTTTGTGATTTATGATAAGGGTGAGATGGTGAGTTACACCAGCGGCTGGACAAGCAAACCAGGCTTACTACTCCGCCTGTGGCGGGCTGAATATCTGTAATTAGTTTTAGCTATCAAATAAAAATCCCGCAGTGATGTCTCATCTGCGGG