COG0526


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0526, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Thiol-disulfide isomerase or thioredoxin
Function(s) descr. Posttranslational modification, protein turnover, chaperones (O)

Occurence in the database

COG0526 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1542 FBDBKF_09995 92306 92812 -1 trxA Thiol-disulfide isomerase or thioredoxin Morganella morganii S1
1 group_1542 EHELCC_04795 284271 284777 -1 trxA Thiol-disulfide isomerase or thioredoxin Morganella morganii S2
2 group_1542 NLDBIP_04795 284067 284573 -1 trxA Thiol-disulfide isomerase or thioredoxin Morganella morganii S4
3 group_1542 LHKJJB_13835 50805 51311 1 trxA Thiol-disulfide isomerase or thioredoxin Morganella morganii S3
4 group_1542 HKOGLL_12700 93087 93593 -1 trxA Thiol-disulfide isomerase or thioredoxin Morganella morganii S5
5 group_1542 F4V73_RS00340 78944 79447 1 protein disulfide oxidoreductase Morganella psychrotolerans
6 group_1542 PMI_RS02175 509244 509747 1 protein disulfide oxidoreductase Proteus mirabilis HI4320
7 group_4558 PMI_RS12035 2660782 2661726 -1 thioredoxin family protein Proteus mirabilis HI4320