Homologs in group_268

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05245 FBDBKF_05245 100.0 Morganella morganii S1 tonB Protein TonB
NLDBIP_12685 NLDBIP_12685 100.0 Morganella morganii S4 tonB Protein TonB
LHKJJB_12545 LHKJJB_12545 100.0 Morganella morganii S3 tonB Protein TonB
HKOGLL_11160 HKOGLL_11160 100.0 Morganella morganii S5 tonB Protein TonB
F4V73_RS05700 F4V73_RS05700 83.8 Morganella psychrotolerans - TonB family protein
PMI_RS06540 PMI_RS06540 52.2 Proteus mirabilis HI4320 tonB TonB system transport protein TonB
PMI_RS11845 PMI_RS11845 39.3 Proteus mirabilis HI4320 - TonB family protein

Distribution of the homologs in the orthogroup group_268

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_268

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P26185 4.59e-30 115 50 2 111 3 tonB Protein TonB Serratia marcescens
P25945 4.53e-29 112 50 3 112 1 tonB Protein TonB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P02929 1.18e-28 111 52 2 104 1 tonB Protein TonB Escherichia coli (strain K12)
P45610 3.8e-28 110 46 1 114 3 tonB Protein TonB Klebsiella pneumoniae
Q05740 5.4e-28 110 43 2 133 3 tonB Protein TonB Yersinia enterocolitica
P46383 7.05e-27 107 59 1 82 3 tonB Protein TonB Klebsiella aerogenes (strain ATCC 13048 / DSM 30053 / CCUG 1429 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006 / CDC 819-56)
Q51368 6.58e-15 76 37 2 114 1 tonB Protein TonB Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_12345
Feature type CDS
Gene tonB
Product Protein TonB
Location 125222 - 125962 (strand: 1)
Length 741 (nucleotides) / 246 (amino acids)

Contig

Accession ZDB_221
Length 181491 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_268
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF03544 Gram-negative bacterial TonB protein C-terminal
PF16031 TonB polyproline region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0810 Cell wall/membrane/envelope biogenesis (M) M Periplasmic protein TonB, links inner and outer membranes

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03832 periplasmic protein TonB - -

Protein Sequence

MPIFRWISWPILISLCLHASVAAAIYYNMNKEVEDEPKVLMVEMAAFAPAPAAAVAEPQPEPEPETEPEPEPEPEPVVKPVIEKPVEKKPVEKKPKPKPKPKKEKKVEKPAVKPVETKAPVSDKPLFSGTPEGQQNVQKAPAGPVGNVASAGQSDVGGGDPKALNRADPVYPARARSLGKEGKVRVRFDVDTDGRIQNIDIIEASPKNMFEREVRNAMRKWRYEKKPKKGMTTTIIFRIDGKTSIQ

Flanking regions ( +/- flanking 50bp)

TACACTAGTGACCATTGTCATTATTAGCTGCTTATAAGATTGTATCGACTATGCCTATTTTTCGCTGGATCAGCTGGCCAATTCTCATTTCTCTTTGTCTGCATGCCTCTGTGGCCGCAGCGATTTACTACAACATGAATAAGGAGGTTGAGGACGAACCTAAAGTGCTGATGGTGGAGATGGCAGCGTTTGCGCCGGCACCGGCAGCAGCTGTGGCTGAACCTCAGCCTGAACCGGAACCCGAAACAGAGCCGGAACCCGAGCCTGAACCTGAGCCGGTCGTGAAGCCGGTTATTGAAAAACCGGTGGAAAAGAAACCGGTTGAGAAAAAACCAAAACCAAAACCAAAACCGAAAAAAGAGAAAAAAGTTGAGAAACCAGCCGTAAAACCGGTTGAAACCAAAGCACCGGTCTCCGATAAACCGCTGTTCAGTGGTACGCCGGAAGGTCAGCAGAATGTGCAGAAAGCCCCTGCAGGCCCGGTCGGAAATGTGGCTTCTGCCGGACAAAGTGATGTTGGCGGTGGTGACCCGAAAGCCCTGAACCGTGCTGATCCGGTCTATCCGGCACGGGCACGCAGCCTCGGTAAAGAAGGGAAGGTGCGGGTCAGATTTGATGTCGATACCGATGGCCGTATTCAGAATATCGATATTATCGAAGCATCACCGAAAAATATGTTTGAACGTGAAGTCCGTAATGCAATGCGTAAATGGCGTTACGAGAAAAAGCCGAAGAAAGGCATGACGACCACCATTATTTTCCGGATCGACGGTAAAACCTCTATTCAGTGATCCGATAAAAAAAGAAAGCCCGGCACATAAAAATGCCGGGTTTTTTGTTT