Homologs in group_510

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01045 FBDBKF_01045 100.0 Morganella morganii S1 yfgM Putative negative regulator of RcsB-dependent stress response, UPF0070 family
NLDBIP_02960 NLDBIP_02960 100.0 Morganella morganii S4 yfgM Putative negative regulator of RcsB-dependent stress response, UPF0070 family
LHKJJB_04475 LHKJJB_04475 100.0 Morganella morganii S3 yfgM Putative negative regulator of RcsB-dependent stress response, UPF0070 family
HKOGLL_02570 HKOGLL_02570 100.0 Morganella morganii S5 yfgM Putative negative regulator of RcsB-dependent stress response, UPF0070 family
F4V73_RS07120 F4V73_RS07120 82.4 Morganella psychrotolerans - tetratricopeptide repeat protein
PMI_RS09095 PMI_RS09095 46.6 Proteus mirabilis HI4320 - tetratricopeptide repeat protein

Distribution of the homologs in the orthogroup group_510

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_510

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76576 2.15e-60 190 46 2 206 1 yfgM Ancillary SecYEG translocon subunit Escherichia coli (strain K12)
O52728 1.37e-31 117 35 6 206 3 1057 Ancillary SecYEG translocon subunit Aggregatibacter actinomycetemcomitans
P43989 4.64e-29 110 35 5 204 1 HI_0370 Ancillary SecYEG translocon subunit Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O51880 3.35e-11 63 23 1 146 3 BUsg_583 Ancillary SecYEG translocon subunit Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57663 5.66e-11 62 25 0 119 3 BU608 Ancillary SecYEG translocon subunit Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_00500
Feature type CDS
Gene yfgM
Product Putative negative regulator of RcsB-dependent stress response, UPF0070 family
Location 118319 - 118936 (strand: 1)
Length 618 (nucleotides) / 205 (amino acids)

Contig

Accession ZDB_213
Length 680219 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_510
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF09976 Tetratricopeptide repeat-like domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2976 Signal transduction mechanisms (T) T Putative negative regulator of RcsB-dependent stress response, UPF0070 family

Protein Sequence

MEVYTTENEQVSALKNFFVENGKAIAAGLIIGIGGIAGWNYYQSHQVSKLQDAAIAYETAIAAKGTPAEQTARLQAFAKEANNNYGAIAGLDLAMKAVDSNDLPAAENALSQALTKTDNEDLKDLINARLARVQLGQKKPDAALATVAAVKGKGWAAYAQDIRGDALLQKGDVKGAQEAYTTGIQSEGAGTIKSVMTFKLDNLAG

Flanking regions ( +/- flanking 50bp)

GAGCGGGCTTTCCGCTCGTCTGAGCGAACTTTTAGGTTAAGGAGAGACGTGTGGAAGTCTATACCACAGAAAATGAACAGGTATCAGCGCTGAAGAATTTCTTTGTCGAAAACGGCAAAGCAATCGCGGCAGGTTTGATCATCGGTATCGGCGGTATTGCCGGCTGGAACTACTATCAGTCTCACCAGGTCAGCAAATTACAGGATGCGGCGATTGCCTATGAAACGGCGATCGCAGCAAAAGGCACCCCGGCGGAGCAGACCGCCCGTCTGCAGGCTTTTGCGAAAGAAGCCAATAACAACTACGGTGCTATCGCCGGTCTTGATCTGGCGATGAAAGCGGTTGACAGCAACGACCTCCCGGCGGCAGAAAATGCCCTGAGCCAGGCGCTGACAAAAACCGATAATGAAGATTTAAAAGATCTGATTAATGCACGTCTGGCCCGTGTACAGCTGGGTCAGAAAAAACCGGATGCCGCGCTGGCGACCGTTGCGGCAGTGAAAGGGAAAGGCTGGGCGGCTTACGCACAGGATATCCGCGGTGACGCCCTGTTACAGAAAGGGGATGTGAAAGGCGCGCAGGAAGCCTACACCACCGGTATTCAGAGTGAAGGTGCCGGGACTATCAAATCCGTTATGACATTCAAACTCGATAACTTAGCCGGGTGAGGGGACTCTCGATAATGCAACTGCGTAAAACACTGCTGGTAGGATTAGTC