VFG043206


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG043206, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein chemotaxis regulatory protein CheY
VF ID VF0394
Category Motility
Protein ID WP_005164479
Function Required for efficient cellular invasion; YplA, a phospholipase is secreted by this type III flagellum secretion system. YplA is required for survival of Y. enterocolitica in the Peyer's patches and for stimulation of the acute inflammatory response of the host to the infection; contributed to the initiation of biofilm formation
Vf_category_id VFC0204

Occurence in the database

VFG043206 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_480 FBDBKF_00765 138974 139366 -1 cheY chemotaxis response regulator CheY Morganella morganii S1
1 group_480 EHELCC_00780 169502 169894 1 cheY chemotaxis response regulator CheY Morganella morganii S2
2 group_480 NLDBIP_02680 510242 510634 -1 cheY chemotaxis response regulator CheY Morganella morganii S4
3 group_480 LHKJJB_04195 117483 117875 -1 cheY chemotaxis response regulator CheY Morganella morganii S3
4 group_480 HKOGLL_02850 169707 170099 1 cheY chemotaxis response regulator CheY Morganella morganii S5
5 group_480 F4V73_RS06765 1403920 1404312 -1 cheY chemotaxis response regulator CheY Morganella psychrotolerans
6 group_480 PMI_RS08115 1773210 1773599 -1 cheY chemotaxis response regulator CheY Proteus mirabilis HI4320