PF22521


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF22521, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF22521
Description Carbamoyltransferase, Kae1-like Domain, second subdomain

Occurence in the database

PF22521 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_987 FBDBKF_05455 99573 101867 -1 hypF carbamoyltransferase HypF Morganella morganii S1
1 group_987 EHELCC_12135 79627 81921 1 hypF carbamoyltransferase HypF Morganella morganii S2
2 group_987 NLDBIP_12475 79582 81876 1 hypF carbamoyltransferase HypF Morganella morganii S4
3 group_987 LHKJJB_12335 79627 81921 1 hypF carbamoyltransferase HypF Morganella morganii S3
4 group_987 HKOGLL_10950 79627 81921 1 hypF carbamoyltransferase HypF Morganella morganii S5
5 group_987 F4V73_RS03840 813148 815448 1 hypF carbamoyltransferase HypF Morganella psychrotolerans
6 group_987 PMI_RS07305 1598883 1601183 -1 hypF carbamoyltransferase HypF Proteus mirabilis HI4320