PF21157


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF21157, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF21157
Description DnaK suppressor protein DksA, N-terminal domain

Occurence in the database

PF21157 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1309 FBDBKF_08020 136568 137023 -1 dksA RNA polymerase-binding protein DksA Morganella morganii S1
1 group_1309 EHELCC_13850 110762 111217 -1 dksA RNA polymerase-binding protein DksA Morganella morganii S2
2 group_1309 NLDBIP_14295 131637 132092 -1 dksA RNA polymerase-binding protein DksA Morganella morganii S4
3 group_1309 LHKJJB_08555 27657 28112 1 dksA RNA polymerase-binding protein DksA Morganella morganii S3
4 group_1309 HKOGLL_08105 27657 28112 1 dksA RNA polymerase-binding protein DksA Morganella morganii S5
5 group_1309 F4V73_RS12970 206704 207159 1 dksA RNA polymerase-binding protein DksA Morganella psychrotolerans
6 group_1309 PMI_RS00965 236089 236544 -1 dksA RNA polymerase-binding protein DksA Proteus mirabilis HI4320