Orthogroup:group_1366


Homologs in group_1366

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08460 FBDBKF_08460 Morganella morganii S1 hflX ribosome rescue GTPase HflX
EHELCC_13065 EHELCC_13065 Morganella morganii S2 hflX ribosome rescue GTPase HflX
NLDBIP_13405 NLDBIP_13405 Morganella morganii S4 hflX ribosome rescue GTPase HflX
LHKJJB_13150 LHKJJB_13150 Morganella morganii S3 hflX ribosome rescue GTPase HflX
HKOGLL_11880 HKOGLL_11880 Morganella morganii S5 hflX ribosome rescue GTPase HflX
F4V73_RS09680 F4V73_RS09680 Morganella psychrotolerans hflX ribosome rescue GTPase HflX
PMI_RS16755 PMI_RS16755 Proteus mirabilis HI4320 hflX GTPase HflX

Distribution of group_1366 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1366 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1366

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1366.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hflX 7

Product

# Product Occurence
1 ribosome rescue GTPase HflX 6
2 GTPase HflX 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2262 7 J Translation, ribosomal structure and biogenesis (J) 50S ribosomal subunit-associated GTPase HflX

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03665 7 GTPase - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01926 7 50S ribosome-binding GTPase
PF13167 7 GTP-binding GTPase N-terminal
PF16360 7 GTP-binding GTPase Middle Region
PF19275 1 HflX C-terminal domain

Annotations of the 612 SwissProt hits

Annotation Number of occurrences
GTP-binding protein 10 6
GTP-binding protein 10 homolog 2
GTP-binding protein At3g49725, chloroplastic 1
GTP-binding protein OBGC, chloroplastic 1
GTPase Der 1
GTPase Era 49
GTPase Era (Fragment) 1
GTPase HflX 22
GTPase Obg 503
GTPase Obg/CgtA 1
GTPase ObgE/CgtA 1
Mitochondrial ribosome-associated GTPase 2 2
Probable GTP-binding protein OBGC1, chloroplastic 2
Putative GTP-binding protein 6 3
Uncharacterized protein MJ1408 1
tRNA modification GTPase MnmE 16

Protein length

Min length 426
Max length 427
Mean length (sd) 426.1 (0.4)
Median length 426.0

Protein length distribution