PF17871

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF17871
Protein list: lists the 24 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF17871
Description AAA lid domain

Occurence in the database

PF17871 is associated with 24 different proteins
The 24 proteins are classified into 3 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_428 FBDBKF_01335 258317 261037 1 tssH type VI secretion system ATPase TssH Morganella morganii S1
1 group_1273 FBDBKF_07065 76459 78744 1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella morganii S1
2 group_131 FBDBKF_15370 81826 84399 1 clpB ATP-dependent chaperone ClpB Morganella morganii S1
3 group_428 EHELCC_00210 47831 50551 -1 tssH type VI secretion system ATPase TssH Morganella morganii S2
4 group_1273 EHELCC_03905 107442 109727 -1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella morganii S2
5 group_131 EHELCC_10875 507 3080 -1 clpB ATP-dependent chaperone ClpB Morganella morganii S2
6 group_428 NLDBIP_03250 629585 632305 1 tssH type VI secretion system ATPase TssH Morganella morganii S4
7 group_1273 NLDBIP_03905 107238 109523 -1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella morganii S4
8 group_131 NLDBIP_11220 507 3080 -1 clpB ATP-dependent chaperone ClpB Morganella morganii S4
9 group_428 LHKJJB_04765 236826 239546 1 tssH type VI secretion system ATPase TssH Morganella morganii S3
10 group_1273 LHKJJB_09735 107352 109637 -1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella morganii S3
11 group_131 LHKJJB_11080 507 3080 -1 clpB ATP-dependent chaperone ClpB Morganella morganii S3
12 group_428 HKOGLL_02280 48036 50756 -1 tssH type VI secretion system ATPase TssH Morganella morganii S5
13 group_1273 HKOGLL_09240 81415 83700 1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella morganii S5
14 group_131 HKOGLL_09690 507 3080 -1 clpB ATP-dependent chaperone ClpB Morganella morganii S5
15 group_1273 F4V73_RS01250 264241 266526 1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Morganella psychrotolerans
16 group_428 F4V73_RS02335 495047 497734 -1 tssH type VI secretion system ATPase TssH Morganella psychrotolerans
17 group_131 F4V73_RS06995 1451477 1453738 -1 AAA family ATPase Morganella psychrotolerans
18 group_131 F4V73_RS09390 1976445 1979222 -1 tssH type VI secretion system ATPase TssH Morganella psychrotolerans
19 group_131 F4V73_RS12085 553 3126 -1 clpB ATP-dependent chaperone ClpB Morganella psychrotolerans
20 group_131 F4V73_RS16840 194692 197388 -1 tssH type VI secretion system ATPase TssH Morganella psychrotolerans
21 group_131 PMI_RS01920 449810 452386 1 clpB ATP-dependent chaperone ClpB Proteus mirabilis HI4320
22 group_1273 PMI_RS03395 749183 751477 1 clpA ATP-dependent Clp protease ATP-binding subunit ClpA Proteus mirabilis HI4320
23 group_428 PMI_RS03640 817939 820650 -1 tssH type VI secretion system ATPase TssH Proteus mirabilis HI4320