PF17414


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF17414, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF17414
Description MatP C-terminal ribbon-helix-helix domain

Occurence in the database

PF17414 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1259 FBDBKF_07335 151622 152080 1 matP macrodomain Ter protein MatP Morganella morganii S1
1 group_1259 EHELCC_03635 34106 34564 -1 matP macrodomain Ter protein MatP Morganella morganii S2
2 group_1259 NLDBIP_03635 33902 34360 -1 matP macrodomain Ter protein MatP Morganella morganii S4
3 group_1259 LHKJJB_09465 34016 34474 -1 matP macrodomain Ter protein MatP Morganella morganii S3
4 group_1259 HKOGLL_09510 156578 157036 1 matP macrodomain Ter protein MatP Morganella morganii S5
5 group_1259 F4V73_RS01520 340065 340523 1 matP macrodomain Ter protein MatP Morganella psychrotolerans
6 group_1259 PMI_RS03850 872704 873171 1 matP macrodomain Ter protein MatP Proteus mirabilis HI4320