PF16326


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF16326, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF16326
Description ABC transporter C-terminal domain

Occurence in the database

PF16326 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1254 FBDBKF_07300 142959 144878 1 uup ABC transporter ATP-binding protein Morganella morganii S1
1 group_1693 FBDBKF_11800 10433 12361 1 uup ABC transporter ATP-binding protein Morganella morganii S1
2 group_1254 EHELCC_03670 41308 43227 -1 uup ABC transporter ATP-binding protein Morganella morganii S2
3 group_1693 EHELCC_14505 122344 124272 -1 uup ABC transporter ATP-binding protein Morganella morganii S2
4 group_1254 NLDBIP_03670 41104 43023 -1 uup ABC transporter ATP-binding protein Morganella morganii S4
5 group_1693 NLDBIP_15600 126281 128209 -1 uup ABC transporter ATP-binding protein Morganella morganii S4
6 group_1254 LHKJJB_09500 41218 43137 -1 uup ABC transporter ATP-binding protein Morganella morganii S3
7 group_1693 LHKJJB_15010 10433 12361 1 uup ABC transporter ATP-binding protein Morganella morganii S3
8 group_1254 HKOGLL_09475 147915 149834 1 uup ABC transporter ATP-binding protein Morganella morganii S5
9 group_1693 HKOGLL_19275 990 2918 -1 uup ABC transporter ATP-binding protein Morganella morganii S5
10 group_1254 F4V73_RS01485 331381 333297 1 ABC transporter ATP-binding protein Morganella psychrotolerans
11 group_1254 PMI_RS03810 862999 864930 1 ABC transporter ATP-binding protein Proteus mirabilis HI4320