PF13522


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13522, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13522
Description Glutamine amidotransferase domain

Occurence in the database

PF13522 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1910 FBDBKF_14235 46462 47979 -1 purF amidophosphoribosyltransferase Morganella morganii S1
1 group_2075 FBDBKF_15510 27299 29128 1 glmS glutamine--fructose-6-phosphate transaminase (isomerizing) Morganella morganii S1
2 group_1910 EHELCC_08045 69006 70523 1 purF amidophosphoribosyltransferase Morganella morganii S2
3 group_2075 EHELCC_15870 26599 28428 1 glmS glutamine--fructose-6-phosphate transaminase (isomerizing) Morganella morganii S2
4 group_1910 NLDBIP_08370 69006 70523 1 purF amidophosphoribosyltransferase Morganella morganii S4
5 group_2075 NLDBIP_16500 52235 54064 -1 glmS glutamine--fructose-6-phosphate transaminase (isomerizing) Morganella morganii S4
6 group_1910 LHKJJB_05895 186636 188153 -1 purF amidophosphoribosyltransferase Morganella morganii S3
7 group_2075 LHKJJB_16305 26599 28428 1 glmS glutamine--fructose-6-phosphate transaminase (isomerizing) Morganella morganii S3
8 group_1910 HKOGLL_05020 53597 55114 1 purF amidophosphoribosyltransferase Morganella morganii S5
9 group_2075 HKOGLL_16075 26599 28428 1 glmS glutamine--fructose-6-phosphate transaminase (isomerizing) Morganella morganii S5
10 group_1910 F4V73_RS02675 562574 564091 1 purF amidophosphoribosyltransferase Morganella psychrotolerans
11 group_2075 F4V73_RS17635 167874 169703 -1 glmS glutamine--fructose-6-phosphate transaminase (isomerizing) Morganella psychrotolerans
12 group_1910 PMI_RS08745 1912830 1914347 -1 purF amidophosphoribosyltransferase Proteus mirabilis HI4320
13 group_2075 PMI_RS15190 3370027 3371853 1 glmS glutamine--fructose-6-phosphate transaminase (isomerizing) Proteus mirabilis HI4320