Orthogroup:group_1948


Homologs in group_1948

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14620 FBDBKF_14620 Morganella morganii S1 lolE lipoprotein-releasing ABC transporter permease subunit LolE
EHELCC_15425 EHELCC_15425 Morganella morganii S2 lolE lipoprotein-releasing ABC transporter permease subunit LolE
NLDBIP_15955 NLDBIP_15955 Morganella morganii S4 lolE lipoprotein-releasing ABC transporter permease subunit LolE
LHKJJB_15885 LHKJJB_15885 Morganella morganii S3 lolE lipoprotein-releasing ABC transporter permease subunit LolE
HKOGLL_15005 HKOGLL_15005 Morganella morganii S5 lolE lipoprotein-releasing ABC transporter permease subunit LolE
F4V73_RS07415 F4V73_RS07415 Morganella psychrotolerans lolE lipoprotein-releasing ABC transporter permease subunit LolE
PMI_RS04320 PMI_RS04320 Proteus mirabilis HI4320 lolE lipoprotein-releasing ABC transporter permease subunit LolE

Distribution of group_1948 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1948 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1948

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1948.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lolE 7

Product

# Product Occurence
1 lipoprotein-releasing ABC transporter permease subunit LolE 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4591 7 M Cell wall/membrane/envelope biogenesis (M) ABC-type transport system involved in lipoprotein release, permease component LolC

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K09808 7 lipoprotein-releasing system permease protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02687 7 FtsX-like permease family
PF12704 7 MacB-like periplasmic core domain

Annotations of the 43 SwissProt hits

Annotation Number of occurrences
ABC transporter permease YtrF 1
Cell division protein FtsX 2
Lipoprotein-releasing system transmembrane protein LolC 10
Lipoprotein-releasing system transmembrane protein LolE 2
Macrolide export ATP-binding/permease protein MacB 13
Macrolide export ATP-binding/permease protein MacB 1 2
Macrolide export ATP-binding/permease protein MacB 2 3
Pyoverdine export ATP-binding/permease protein PvdT 7
Uncharacterized ABC transporter permease MJ0797 1
Uncharacterized ABC transporter permease MJ1507 1
Uncharacterized membrane protein BUsg_286 1

Protein length

Unique protein length 415

Protein length distribution