PF12146


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF12146, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 24 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF12146
Description Serine aminopeptidase, S33

Occurence in the database

PF12146 is associated with 24 different proteins (see tab "Protein list" and "Profile")
The 24 proteins are classified into 5 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_687 FBDBKF_02790 254756 255823 1 pldB Lysophospholipase, alpha-beta hydrolase superfamily Morganella morganii S1
1 group_1354 FBDBKF_08390 54415 55416 1 pldB lysophospholipase L2 Morganella morganii S1
2 group_2973 FBDBKF_16575 44144 45910 -1 pldB Lysophospholipase, alpha-beta hydrolase superfamily Morganella morganii S1
3 group_3575 FBDBKF_18775 709 1650 -1 pldB Lysophospholipase, alpha-beta hydrolase superfamily Morganella morganii S1
4 group_687 EHELCC_03260 642576 643643 1 pldB Lysophospholipase, alpha-beta hydrolase superfamily Morganella morganii S2
5 group_2973 EHELCC_08440 161130 162896 -1 pldB Lysophospholipase, alpha-beta hydrolase superfamily Morganella morganii S2
6 group_1354 EHELCC_13135 108309 109310 -1 pldB lysophospholipase L2 Morganella morganii S2
7 group_3575 EHELCC_16970 710 1651 -1 pldB Lysophospholipase, alpha-beta hydrolase superfamily Morganella morganii S2
8 group_687 NLDBIP_00200 36493 37560 -1 pldB Lysophospholipase, alpha-beta hydrolase superfamily Morganella morganii S4
9 group_2973 NLDBIP_08765 161130 162896 -1 pldB Lysophospholipase, alpha-beta hydrolase superfamily Morganella morganii S4
10 group_1354 NLDBIP_13475 108309 109310 -1 pldB lysophospholipase L2 Morganella morganii S4
11 group_3575 NLDBIP_18350 709 1650 -1 pldB Lysophospholipase, alpha-beta hydrolase superfamily Morganella morganii S4
12 group_687 LHKJJB_01835 355125 356192 1 pldB Lysophospholipase, alpha-beta hydrolase superfamily Morganella morganii S3
13 group_2973 LHKJJB_05500 94263 96029 1 pldB Lysophospholipase, alpha-beta hydrolase superfamily Morganella morganii S3
14 group_3575 LHKJJB_09275 190679 191620 1 pldB Lysophospholipase, alpha-beta hydrolase superfamily Morganella morganii S3
15 group_1354 LHKJJB_13080 53133 54134 1 pldB lysophospholipase L2 Morganella morganii S3
16 group_687 HKOGLL_01875 360636 361703 1 pldB Lysophospholipase, alpha-beta hydrolase superfamily Morganella morganii S5
17 group_2973 HKOGLL_05415 145721 147487 -1 pldB Lysophospholipase, alpha-beta hydrolase superfamily Morganella morganii S5
18 group_3575 HKOGLL_08825 190679 191620 1 pldB Lysophospholipase, alpha-beta hydrolase superfamily Morganella morganii S5
19 group_1354 HKOGLL_11950 108309 109310 -1 pldB lysophospholipase L2 Morganella morganii S5
20 group_2973 F4V73_RS03105 663681 665447 -1 bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase Morganella psychrotolerans
21 group_1354 F4V73_RS09590 19158 20159 1 pldB lysophospholipase L2 Morganella psychrotolerans
22 group_3133 PMI_RS10070 2185086 2198945 1 rtxA MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin RtxA Proteus mirabilis HI4320
23 group_1354 PMI_RS16645 3669089 3670093 1 pldB lysophospholipase L2 Proteus mirabilis HI4320