PF12146
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF12146, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains
within the database. 24 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.
Description
External link |
PF12146 |
Description |
Serine aminopeptidase, S33 |
Occurence in the database
PF12146 is associated with 24 different proteins (see tab "Protein list" and "Profile") |
The 24 proteins are classified into 5 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_687 |
FBDBKF_02790 |
254756 |
255823 |
1 |
pldB |
Lysophospholipase, alpha-beta hydrolase superfamily |
Morganella morganii S1 |
1 |
group_1354 |
FBDBKF_08390 |
54415 |
55416 |
1 |
pldB |
lysophospholipase L2 |
Morganella morganii S1 |
2 |
group_2973 |
FBDBKF_16575 |
44144 |
45910 |
-1 |
pldB |
Lysophospholipase, alpha-beta hydrolase superfamily |
Morganella morganii S1 |
3 |
group_3575 |
FBDBKF_18775 |
709 |
1650 |
-1 |
pldB |
Lysophospholipase, alpha-beta hydrolase superfamily |
Morganella morganii S1 |
4 |
group_687 |
EHELCC_03260 |
642576 |
643643 |
1 |
pldB |
Lysophospholipase, alpha-beta hydrolase superfamily |
Morganella morganii S2 |
5 |
group_2973 |
EHELCC_08440 |
161130 |
162896 |
-1 |
pldB |
Lysophospholipase, alpha-beta hydrolase superfamily |
Morganella morganii S2 |
6 |
group_1354 |
EHELCC_13135 |
108309 |
109310 |
-1 |
pldB |
lysophospholipase L2 |
Morganella morganii S2 |
7 |
group_3575 |
EHELCC_16970 |
710 |
1651 |
-1 |
pldB |
Lysophospholipase, alpha-beta hydrolase superfamily |
Morganella morganii S2 |
8 |
group_687 |
NLDBIP_00200 |
36493 |
37560 |
-1 |
pldB |
Lysophospholipase, alpha-beta hydrolase superfamily |
Morganella morganii S4 |
9 |
group_2973 |
NLDBIP_08765 |
161130 |
162896 |
-1 |
pldB |
Lysophospholipase, alpha-beta hydrolase superfamily |
Morganella morganii S4 |
10 |
group_1354 |
NLDBIP_13475 |
108309 |
109310 |
-1 |
pldB |
lysophospholipase L2 |
Morganella morganii S4 |
11 |
group_3575 |
NLDBIP_18350 |
709 |
1650 |
-1 |
pldB |
Lysophospholipase, alpha-beta hydrolase superfamily |
Morganella morganii S4 |
12 |
group_687 |
LHKJJB_01835 |
355125 |
356192 |
1 |
pldB |
Lysophospholipase, alpha-beta hydrolase superfamily |
Morganella morganii S3 |
13 |
group_2973 |
LHKJJB_05500 |
94263 |
96029 |
1 |
pldB |
Lysophospholipase, alpha-beta hydrolase superfamily |
Morganella morganii S3 |
14 |
group_3575 |
LHKJJB_09275 |
190679 |
191620 |
1 |
pldB |
Lysophospholipase, alpha-beta hydrolase superfamily |
Morganella morganii S3 |
15 |
group_1354 |
LHKJJB_13080 |
53133 |
54134 |
1 |
pldB |
lysophospholipase L2 |
Morganella morganii S3 |
16 |
group_687 |
HKOGLL_01875 |
360636 |
361703 |
1 |
pldB |
Lysophospholipase, alpha-beta hydrolase superfamily |
Morganella morganii S5 |
17 |
group_2973 |
HKOGLL_05415 |
145721 |
147487 |
-1 |
pldB |
Lysophospholipase, alpha-beta hydrolase superfamily |
Morganella morganii S5 |
18 |
group_3575 |
HKOGLL_08825 |
190679 |
191620 |
1 |
pldB |
Lysophospholipase, alpha-beta hydrolase superfamily |
Morganella morganii S5 |
19 |
group_1354 |
HKOGLL_11950 |
108309 |
109310 |
-1 |
pldB |
lysophospholipase L2 |
Morganella morganii S5 |
20 |
group_2973 |
F4V73_RS03105 |
663681 |
665447 |
-1 |
|
bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase |
Morganella psychrotolerans |
21 |
group_1354 |
F4V73_RS09590 |
19158 |
20159 |
1 |
pldB |
lysophospholipase L2 |
Morganella psychrotolerans |
22 |
group_3133 |
PMI_RS10070 |
2185086 |
2198945 |
1 |
rtxA |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin RtxA |
Proteus mirabilis HI4320 |
23 |
group_1354 |
PMI_RS16645 |
3669089 |
3670093 |
1 |
pldB |
lysophospholipase L2 |
Proteus mirabilis HI4320 |