Orthogroup:group_3929


Homologs in group_3929

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS10070 PMI_RS10070 Proteus mirabilis HI4320 rtxA MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin RtxA

Distribution of group_3929 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_3929

Orthogroup content: 1 members

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This page summarizes the annotation of all members of the orthologous group group_3929.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rtxA 1

Product

# Product Occurence
1 MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin RtxA 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1073 1 T Signal transduction mechanisms (T) Fermentation-respiration switch esterase FrsA, DUF1100 family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K10953 1 RTX toxin RtxA Vibrio cholerae infection Vibrio cholerae pathogenicity signature, cholera toxins

Pfam domain Annotation(s)

Domain ID Occurences Description
PF07634 1 RtxA repeat
PF11647 1 Membrane Localization Domain
PF11713 1 Peptidase C80 family
PF12146 1 Serine aminopeptidase, S33

Annotations of the 48 SwissProt hits

Annotation Number of occurrences
Alpha/beta hydrolase domain-containing protein 17A 4
Alpha/beta hydrolase domain-containing protein 17B 6
Alpha/beta hydrolase domain-containing protein 17C 8
Alpha/beta hydrolase domain-containing protein aho-3 1
Bifunctional hemolysin/adenylate cyclase 2
Cytotoxin-L 2
Hemolysin, chromosomal 1
Hemolysin, plasmid 1
Leukotoxin 1
Lysophosphatidylserine lipase ABHD12 8
Multifunctional-autoprocessing repeats-in-toxin 2
Protein ABHD12B 1
Protein ABHD13 5
Protein bem46 1
Putative alpha/beta hydrolase L404 1
Uncharacterized membrane protein YNL320W 1
Uncharacterized protein MT2364 1
Uncharacterized protein R595 1
Uncharacterized protein Rv2307c 1