PF11808


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF11808, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF11808
Description Phosphate regulon sensor protein PhoR

Occurence in the database

PF11808 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2266 FBDBKF_17430 17305 18600 -1 phoR phosphate regulon sensor histidine kinase PhoR Morganella morganii S1
1 group_2266 EHELCC_17325 17305 18600 -1 phoR phosphate regulon sensor histidine kinase PhoR Morganella morganii S2
2 group_2266 NLDBIP_17870 24196 25491 1 phoR phosphate regulon sensor histidine kinase PhoR Morganella morganii S4
3 group_2266 LHKJJB_17790 24194 25489 1 phoR phosphate regulon sensor histidine kinase PhoR Morganella morganii S3
4 group_2266 HKOGLL_17800 24194 25489 1 phoR phosphate regulon sensor histidine kinase PhoR Morganella morganii S5
5 group_2266 F4V73_RS16605 141038 142333 -1 phoR phosphate regulon sensor histidine kinase PhoR Morganella psychrotolerans
6 group_2266 PMI_RS00255 79657 80949 1 phoR phosphate regulon sensor histidine kinase PhoR Proteus mirabilis HI4320