PF10928


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF10928, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 6 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF10928
Description Protein of unknown function (DUF2810)

Occurence in the database

PF10928 is associated with 6 different proteins (see tab "Protein list" and "Profile")
The 6 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2829 FBDBKF_10300 13999 14361 1 yibL YibL family ribosome-associated protein Morganella morganii S1
1 group_2829 EHELCC_14635 13989 14351 1 yibL YibL family ribosome-associated protein Morganella morganii S2
2 group_2829 NLDBIP_14465 13989 14351 1 yibL YibL family ribosome-associated protein Morganella morganii S4
3 group_2829 LHKJJB_14880 127375 127737 -1 yibL YibL family ribosome-associated protein Morganella morganii S3
4 group_2829 HKOGLL_13500 127375 127737 -1 yibL YibL family ribosome-associated protein Morganella morganii S5
5 group_2829 F4V73_RS13975 5415 5777 1 YibL family ribosome-associated protein Morganella psychrotolerans