Homologs in group_2829

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10300 FBDBKF_10300 100.0 Morganella morganii S1 yibL YibL family ribosome-associated protein
EHELCC_14635 EHELCC_14635 100.0 Morganella morganii S2 yibL YibL family ribosome-associated protein
NLDBIP_14465 NLDBIP_14465 100.0 Morganella morganii S4 yibL YibL family ribosome-associated protein
LHKJJB_14880 LHKJJB_14880 100.0 Morganella morganii S3 yibL YibL family ribosome-associated protein
F4V73_RS13975 F4V73_RS13975 86.7 Morganella psychrotolerans - YibL family ribosome-associated protein

Distribution of the homologs in the orthogroup group_2829

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2829

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ADK8 3.7e-55 171 71 0 120 1 yibL Uncharacterized protein YibL Escherichia coli (strain K12)
P0ADK9 3.7e-55 171 71 0 120 4 yibL Uncharacterized protein YibL Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ADL0 3.7e-55 171 71 0 120 4 yibL Uncharacterized protein YibL Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_13500
Feature type CDS
Gene yibL
Product YibL family ribosome-associated protein
Location 127375 - 127737 (strand: -1)
Length 363 (nucleotides) / 120 (amino acids)

Contig

Accession ZDB_691
Length 141725 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2829
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF10928 Protein of unknown function (DUF2810)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K14762 ribosome-associated protein - -

Protein Sequence

MKENEKAQIKLLSDRLDLTRHQMAGMLQKNETEKYAELEKEKAALETDIARLKEQRSKKLSKEAQKLVDMPFKRSITKKEQADIGKLKKAVRGLIIVHPMTALGREMGLDDMTGFSKTDF

Flanking regions ( +/- flanking 50bp)

GCAGAATGATGTATACTTGCCGGTAAGAAATTTAGTCATGGTTAATTAAAATGAAAGAAAACGAAAAAGCACAAATCAAGCTTCTCAGCGACCGTTTAGACCTTACCCGTCACCAGATGGCCGGTATGCTGCAAAAGAACGAAACGGAAAAGTACGCAGAACTTGAGAAAGAAAAAGCCGCGCTGGAAACTGACATTGCCCGTCTGAAGGAACAACGCAGCAAGAAACTCAGCAAAGAAGCGCAGAAGCTGGTGGATATGCCATTCAAACGTTCTATCACTAAGAAAGAACAGGCTGATATCGGCAAGCTGAAGAAAGCGGTGCGGGGCCTGATCATTGTCCATCCGATGACGGCGTTAGGCCGCGAAATGGGACTGGATGATATGACCGGTTTTTCTAAGACTGATTTCTGAATAGTAATTACTCTCTTTGTTTACAACGTCCGGTTCCGGCATAAACCGGG